RNA–Protein interactions for RNA: ENST00000620204.3

TNFAIP3-210, Transcript of TNF alpha induced protein 3, humanhuman

TSL 5 BASIC

Gene TNFAIP3, Length 3,817 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP3-210ENST00000620204 PIK3C2AO00443 1686 aa10.93□□□□□ -0.66
TNFAIP3-210ENST00000620204 FMN2Q9NZ56 1722 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZNF18P17022 549 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 KRT31Q15323 416 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 TEX11Q8IYF3 940 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 IFNL2Q8IZJ0 200 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 OSBP2Q969R2 916 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 PLIN2Q99541 437 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 DSCC1Q9BVC3 393 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 HAUS4Q9H6D7 363 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 ADD3Q9UEY8 706 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 LSP1P33241 339 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 AARSP49588 968 aaKnown RBP eCLIP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 NAA35Q5VZE5 725 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 CALR3Q96L12 384 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 CCT8L2Q96SF2 557 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 NFU1Q9UMS0 254 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 PDE2AO00408 941 aaPredicted RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 GCFC2P16383 781 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 TTF1Q15361 905 aaPredicted RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 PTPROQ16827 1216 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 HIBCHQ6NVY1 386 aaPredicted RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 FAM43BQ6ZT52 329 aaPredicted RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 SEC31BQ9NQW1 1179 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 HELLSQ9NRZ9 838 aa10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 CPSF2Q9P2I0 782 aaKnown RBP10.92□□□□□ -0.66
TNFAIP3-210ENST00000620204 ANKRD18BA2A2Z9 1011 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 CD44P16070 742 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 CYLC1P35663 651 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 KRT83P78385 493 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 MYO1EQ12965 1108 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 KANK3Q6NY19 840 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZNF473Q8WTR7 871 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 CCDC42Q96M95 316 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 HPSEQ9Y251 543 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 TTC26A0AVF1 554 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 AKR1B10O60218 316 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 MYBL1P10243 752 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 NR1D1P20393 614 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 COPB1P53618 953 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 GUCY2DQ02846 1103 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 PARP9Q8IXQ6 854 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 SENP2Q9HC62 589 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 VPS54Q9P1Q0 977 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 PEAK1Q9H792 1746 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 TULP1O00294 542 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 MORC3Q14149 939 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZNF174Q15697 407 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 KRT26Q7Z3Y9 468 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 NOSTRINQ8IVI9 506 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 TSEN2Q8NCE0 465 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZCRB1Q8TBF4 217 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 SGSM3Q96HU1 749 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 MED15Q96RN5 788 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ANGEL1Q9UNK9 670 aaKnown RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZMYM6O95789 1325 aa10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZNF142P52746 1687 aaPredicted RBP10.91□□□□□ -0.66
TNFAIP3-210ENST00000620204 KCNJ18B7U540 433 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 GCKRQ14397 625 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 KCNJ12Q14500 433 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 PTPAQ15257 358 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 AP1ARQ63HQ0 302 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 NLRP14Q86W24 1093 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 AMOTL1Q8IY63 956 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 EHBP1Q8NDI1 1231 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 TRIM47Q96LD4 638 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZIM3Q96PE6 472 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 LACRTQ9GZZ8 138 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 KIF9Q9HAQ2 790 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 EPB41L5Q9HCM4 733 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 MYO1AQ9UBC5 1043 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 HPS5Q9UPZ3 1129 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 USO1O60763 962 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 TACC1O75410 805 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 ERCC5P28715 1186 aaPredicted RBP10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 PTPN12Q05209 780 aaKnown RBP10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 PI16Q6UXB8 463 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 TRAPPC11Q7Z392 1133 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 ZBTB12Q9Y330 459 aaPredicted RBP10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 SALL1Q9NSC2 1324 aa10.9□□□□□ -0.66
TNFAIP3-210ENST00000620204 SMIM23A6NLE4 172 aa10.9□□□□□ -0.67
TNFAIP3-210ENST00000620204 IGKV5-2P06315 115 aa10.9□□□□□ -0.67
TNFAIP3-210ENST00000620204 CCDC51Q96ER9 411 aa10.9□□□□□ -0.67
TNFAIP3-210ENST00000620204 C8orf37Q96NL8 207 aa10.9□□□□□ -0.67
TNFAIP3-210ENST00000620204 CEP126Q9P2H0 1117 aa10.9□□□□□ -0.67
TNFAIP3-210ENST00000620204 TNS3Q68CZ2 1445 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 OPLAHO14841 1288 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 NCK2O43639 380 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 BUB1O43683 1085 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 ZMYM1Q5SVZ6 1142 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 NFRKBQ6P4R8 1299 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 ANKRD13DQ6ZTN6 518 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 TAX1BP1Q86VP1 789 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 KLHL7Q8IXQ5 586 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 NELFBQ8WX92 580 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 ACSBG1Q96GR2 724 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 FAM170AA1A519 330 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 TTMPQ5BVD1 217 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 CYB5D1Q6P9G0 228 aa10.89□□□□□ -0.67
TNFAIP3-210ENST00000620204 EGFL6Q8IUX8 553 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms