RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 AFG3L2Q9Y4W6 797 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 RLFQ13129 1914 aa12.82□□□□□ -0.36
SNORD3D-201ENST00000619178 TRIM75PA6NK02 468 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 KLRF2D3W0D1 207 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 PLA2G6O60733 806 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 SNHG28P0DPA3 235 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 IFNAR1P17181 557 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 STAT2P52630 851 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 SSRP1Q08945 709 aaKnown RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 ZNF543Q08ER8 600 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 MTMR2Q13614 643 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 SH3D19Q5HYK7 790 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 CCDC83Q8IWF9 413 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 C12orf42Q96LP6 360 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 RNF26Q9BY78 433 aaPredicted RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 GPHNQ9NQX3 736 aaPredicted RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 FEM1BQ9UK73 627 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 ABT1Q9ULW3 272 aaKnown RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 CTDP1Q9Y5B0 961 aaPredicted RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 ZNFX1Q9P2E3 1918 aaKnown RBP12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 STK36Q9NRP7 1315 aa12.81□□□□□ -0.36
SNORD3D-201ENST00000619178 PALM3A6NDB9 673 aaPredicted RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 hCG_1984214I3L0E3 225 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 CD2BP2O95400 341 aaKnown RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 NDUFB10O96000 172 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 CETPP11597 493 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 ECE1P42892 770 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 INHBEP58166 350 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 JAG1P78504 1218 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 SCRN1Q12765 414 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 ZYXQ15942 572 aaKnown RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 CST9Q5W186 159 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 RGMBQ6NW40 437 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 DLK2Q6UY11 383 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 CLEC10AQ8IUN9 316 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 CCDC144CPQ8IYA2 1237 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 FAM177A1Q8N128 213 aaPredicted RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 ZNF713Q8N859 430 aaPredicted RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 NKX2-3Q8TAU0 364 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 RRP36Q96EU6 259 aaKnown RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 WNK4Q96J92 1243 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 LARP6Q9BRS8 491 aaKnown RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 MYL10Q9BUA6 226 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 SPZ1Q9BXG8 430 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 SENP2Q9HC62 589 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 PNMA3Q9UL41 463 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 FZD1Q9UP38 647 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 HPS5Q9UPZ3 1129 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 KCNH4Q9UQ05 1017 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 TLL2Q9Y6L7 1015 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 MYPNQ86TC9 1320 aa12.8□□□□□ -0.36
SNORD3D-201ENST00000619178 A0A0G2JMZ2 1700 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 A0A1W2PRG0 241 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 DEXIO95424 95 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 ZNF157P51786 506 aaPredicted RBP12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 HMGCS2P54868 508 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 COL9A3Q14050 684 aaPredicted RBP12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 TRIM29Q14134 588 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 OTUD7BQ6GQQ9 843 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 TMTC3Q6ZXV5 915 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 MOB2Q70IA6 237 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 SAPCD2Q86UD0 394 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 SIAH1Q8IUQ4 282 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 REM2Q8IYK8 340 aaPredicted RBP12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 NECAB1Q8N987 351 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 PRPF38AQ8NAV1 312 aaKnown RBP12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 RGS22Q8NE09 1264 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 ACER1Q8TDN7 264 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 CCDC12Q8WUD4 166 aaPredicted RBP12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 CLMNQ96JQ2 1002 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 TANGO6Q9C0B7 1094 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 MAD2L2Q9UI95 211 aa12.79□□□□□ -0.36
SNORD3D-201ENST00000619178 A0A0G2JLL6 359 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 MANSC4A6NHS7 340 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L15C9J2P7 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L13C9JLJ4 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 TMEM232C9JQI7 657 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L11C9JVI0 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L18D6R9N7 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L22D6RA61 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L17D6RBQ6 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L19D6RCP7 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L20D6RJB6 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 IRF6O14896 467 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 PRPF3O43395 683 aaKnown RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 LARGE1O95461 756 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 FMNL1O95466 1100 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 RXRAP19793 462 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 OSBPP22059 807 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 APLP1P51693 650 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 USP17L24Q0WX57 530 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 SHROOM1Q2M3G4 852 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 BTNL9Q6UXG8 535 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 GADL1Q6ZQY3 521 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 PRRT2Q7Z6L0 340 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 GTF3C2Q8WUA4 911 aaPredicted RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 NCOA5Q9HCD5 579 aaKnown RBP12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 GPCPD1Q9NPB8 672 aa12.78□□□□□ -0.36
SNORD3D-201ENST00000619178 CREBZFQ9NS37 354 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms