RNA–Protein interactions for RNA: ENST00000618148.1

VPS45-213, Transcript of vacuolar protein sorting 45 homolog, humanhuman

TSL 2

Gene VPS45, Length 1,670 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45-213ENST00000618148 CDC27P30260 824 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 NF2P35240 595 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 FKBP1BP68106 108 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 RTN1Q16799 776 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 LDLRAD1Q5T700 205 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 SYNE3Q6ZMZ3 975 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 PPP1R3FQ6ZSY5 799 aaPredicted RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 CCDC83Q8IWF9 413 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 NSUN7Q8NE18 718 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 GMCL1Q96IK5 515 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 NCOA5Q9HCD5 579 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 RBM28Q9NW13 759 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 ZSCAN21Q9Y5A6 473 aaPredicted RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 SNCAIPQ9Y6H5 919 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 PHIPQ8WWQ0 1821 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 STK36Q9NRP7 1315 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 PALM3A6NDB9 673 aaPredicted RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 GOLGA8AA7E2F4 631 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 USP17L5A8MUK1 530 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 KIF3CO14782 793 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 PTPRAP18433 802 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 SMARCA1P28370 1054 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 KIF5BP33176 963 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 IREB2P48200 963 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 SLC4A3P48751 1232 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 RAB3GAP1Q15042 981 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 TMEM92Q6UXU6 159 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 TMTC3Q6ZXV5 915 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 RGS22Q8NE09 1264 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 MYL10Q9BUA6 226 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 KIAA1683Q9H0B3 1180 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 SH2D4AQ9H788 454 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 ARHGEF10LQ9HCE6 1279 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 CWC22Q9HCG8 908 aaKnown RBP8.72□□□□□ -1.01
VPS45-213ENST00000618148 CLIP2Q9UDT6 1046 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 MAD2L2Q9UI95 211 aa8.72□□□□□ -1.01
VPS45-213ENST00000618148 TRAF5O00463 557 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 CDKL5O76039 1030 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 RXRAP19793 462 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 ADD1P35611 737 aaKnown RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 CCT2P78371 535 aaKnown RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 HMGN5P82970 282 aaKnown RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 ZNF543Q08ER8 600 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 STK3Q13188 491 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 VGLL4Q14135 290 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 ASPRV1Q53RT3 343 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 NBPF11Q86T75 865 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 ANKRD13AQ8IZ07 590 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 LRRC47Q8N1G4 583 aaKnown RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 EFCAB3Q8N7B9 438 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 CTCFLQ8NI51 663 aaPredicted RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 ACER1Q8TDN7 264 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 DCAF4Q8WV16 495 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 ZKSCAN4Q969J2 545 aaPredicted RBP8.71□□□□□ -1.02
VPS45-213ENST00000618148 C12orf42Q96LP6 360 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 LZTS2Q9BRK4 669 aa8.71□□□□□ -1.02
VPS45-213ENST00000618148 PASKQ96RG2 1323 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 PTPDC1A2A3K4 754 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 SPDYE5A6NIY4 337 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 F5H6K3 240 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 NDUFB10O96000 172 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 ECE1P42892 770 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 GNAQP50148 359 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 KLRC3Q07444 240 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 SLC35G1Q2M3R5 365 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 GPATCH4Q5T3I0 446 aaKnown RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 CPLX2Q6PUV4 134 aaKnown RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 RAB11FIP4Q86YS3 637 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 ZNF526Q8TF50 670 aaPredicted RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 LPAR1Q92633 364 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 SPZ1Q9BXG8 430 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 RNF26Q9BY78 433 aaPredicted RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 VCPKMTQ9H867 229 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 GPBP1L1Q9HC44 474 aaPredicted RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 PICK1Q9NRD5 415 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 FRMD4AQ9P2Q2 1039 aaPredicted RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 CIZ1Q9ULV3 898 aaPredicted RBP8.7□□□□□ -1.02
VPS45-213ENST00000618148 FZD1Q9UP38 647 aa8.7□□□□□ -1.02
VPS45-213ENST00000618148 CNTNAP5Q8WYK1 1306 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 CPLX1O14810 134 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 JAK2O60674 1132 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 PLA2G6O60733 806 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 PLEKHA8P1O95397 391 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 PARP1P09874 1014 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 FDPSP14324 419 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 BACE1P56817 501 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 LSM11P83369 360 aaKnown RBP eCLIP8.69□□□□□ -1.02
VPS45-213ENST00000618148 SH3D19Q5HYK7 790 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 KIAA1755Q5JYT7 1200 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 BTNL9Q6UXG8 535 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 RASGRP2Q7LDG7 609 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 ARMC9Q7Z3E5 817 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 STAG2Q8N3U4 1231 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 SRBD1Q8N5C6 995 aaKnown RBP8.69□□□□□ -1.02
VPS45-213ENST00000618148 ZNF280CQ8ND82 737 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 NUP133Q8WUM0 1156 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 AS3MTQ9HBK9 375 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 GOPCQ9HD26 462 aa8.69□□□□□ -1.02
VPS45-213ENST00000618148 DAXXQ9UER7 740 aaPredicted RBP8.69□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms