RNA–Protein interactions for RNA: ENST00000617767.4

CPNE4-214, Transcript of copine 4, humanhuman

TSL 2 BASIC

Gene CPNE4, Length 3,556 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-214ENST00000617767 RANBP17Q9H2T7 1088 aaKnown RBP6.29□□□□□ -1.4
CPNE4-214ENST00000617767 PSD3Q9NYI0 1048 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 ODF2LQ9ULJ1 636 aa6.29□□□□□ -1.4
CPNE4-214ENST00000617767 SASH3O75995 380 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 UFL1O94874 794 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 USP17L8P0C7I0 530 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 RDXP35241 583 aaKnown RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 PPARAQ07869 468 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CRYMQ14894 314 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 STK38Q15208 465 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 PDCD2Q16342 344 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 AKNAD1Q5T1N1 836 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SPTY2D1Q68D10 685 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SLC44A5Q8NCS7 719 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 MKL1Q969V6 931 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 DNAJC25Q9H1X3 360 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 TRPC5Q9UL62 973 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 ENO4A6NNW6 628 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 RAD21O60216 631 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 RTN2O75298 545 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CDKL5O76039 1030 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 WTAPQ15007 396 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 PRR5LQ6MZQ0 368 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 KRT27Q7Z3Y8 459 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 DRC7Q8IY82 874 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 UBXN6Q9BZV1 441 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 NYXQ9GZU5 481 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 GOLPH3LQ9H4A5 285 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CD248Q9HCU0 757 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 MCM9Q9NXL9 1143 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 ERICH2A1L162 156 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SH2B2O14492 632 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SERPINB2P05120 415 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 NEFHP12036 1026 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 IARSP41252 1262 aaKnown RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 RANBP1P43487 201 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CLNS1AP54105 237 aaKnown RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 ANO6Q4KMQ2 910 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 MAPKAPK5Q8IW41 473 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 FSIP1Q8NA03 581 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SMARCC2Q8TAQ2 1214 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 FAM163AQ96GL9 167 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 SCAND2PQ9GZW5 306 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CPVLQ9H3G5 476 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 LY9Q9HBG7 655 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 ARGLU1Q9NWB6 273 aaPredicted RBP6.28□□□□□ -1.4
CPNE4-214ENST00000617767 RFX7Q2KHR2 1363 aa6.28□□□□□ -1.4
CPNE4-214ENST00000617767 CNTNAP4Q9C0A0 1308 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 USP27XA6NNY8 438 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TMCO5BA8MYB1 307 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 APBA3O96018 575 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PECAM1P16284 738 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TPP2P29144 1249 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 CCDC15Q0P6D6 951 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 SF3B3Q15393 1217 aaKnown RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 MAP3K11Q16584 847 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PTPN21Q16825 1174 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 DOK7Q18PE1 504 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 HSP90AA4PQ58FG1 418 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 SYNE3Q6ZMZ3 975 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 IGDCC4Q8TDY8 1250 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 ZNF274Q96GC6 653 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 CLIC6Q96NY7 704 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 ARPC5LQ9BPX5 153 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 NRBP1Q9UHY1 535 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 CHD4Q14839 1912 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TNKSO95271 1327 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 USP5P45974 858 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 RAB27AP51159 221 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 GPSM2P81274 684 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 NR5A1Q13285 461 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PICALMQ13492 652 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 UBE4AQ14139 1066 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PTPN14Q15678 1187 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PHC3Q8NDX5 983 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TGFBRAP1Q8WUH2 860 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 VPS18Q9P253 973 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 WDR3Q9UNX4 943 aaKnown RBP eCLIP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 FAM205CA6NFA0 338 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 BTBD18B2RXH4 712 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 GYS1P13807 737 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TM4SF1P30408 202 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 KRT40Q6A162 431 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 PDILTQ8N807 584 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 SPDYE1Q8NFV5 336 aaPredicted RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 TBC1D5Q92609 795 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 NSUN4Q96CB9 384 aaKnown RBP6.27□□□□□ -1.41
CPNE4-214ENST00000617767 SDF4Q9BRK5 362 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 VPS54Q9P1Q0 977 aa6.27□□□□□ -1.41
CPNE4-214ENST00000617767 CASZ1Q86V15 1759 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 PLEKHA8P1O95397 391 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 FMNL1O95466 1100 aaPredicted RBP6.26□□□□□ -1.41
CPNE4-214ENST00000617767 TBC1D8O95759 1140 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 SCNN1DP51172 638 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 EIF6P56537 245 aaKnown RBP6.26□□□□□ -1.41
CPNE4-214ENST00000617767 ICA1Q05084 483 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 DDR1Q08345 913 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 TXNRD1Q16881 649 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 PROM2Q8N271 834 aa6.26□□□□□ -1.41
CPNE4-214ENST00000617767 SH3RF3Q8TEJ3 882 aaPredicted RBP6.26□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 89.8 ms