RNA–Protein interactions for RNA: ENST00000617172.4

TARDBP-218, Transcript of TAR DNA binding protein, humanhuman

TSL 5

Gene TARDBP, Length 980 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TARDBP-218ENST00000617172 MKL1Q969V6 931 aa11.53□□□□□ -0.56
TARDBP-218ENST00000617172 ATG4CQ96DT6 458 aa11.53□□□□□ -0.56
TARDBP-218ENST00000617172 NAPBQ9H115 298 aa11.53□□□□□ -0.56
TARDBP-218ENST00000617172 RWDD1Q9H446 243 aaPredicted RBP11.53□□□□□ -0.56
TARDBP-218ENST00000617172 C11orf49Q9H6J7 331 aa11.53□□□□□ -0.56
TARDBP-218ENST00000617172 PPP1R9AQ9ULJ8 1098 aa11.53□□□□□ -0.56
TARDBP-218ENST00000617172 F5H6K3 240 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 VWA5AO00534 786 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 IGHA2P01877 340 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 CCND3P30281 292 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 STAT3P40763 770 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 PDE1AP54750 535 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 KLRC3Q07444 240 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 TMEM132BQ14DG7 1078 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 SAMD1Q6SPF0 538 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 RIOX2Q8IUF8 465 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 PRPF38AQ8NAV1 312 aaKnown RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 NPLOC4Q8TAT6 608 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 DIS3LQ8TF46 1054 aaKnown RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 YTHDC1Q96MU7 727 aaKnown RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 SEC62Q99442 399 aaKnown RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 EPB41L4AQ9HCS5 686 aaPredicted RBP11.52□□□□□ -0.57
TARDBP-218ENST00000617172 MTMR4Q9NYA4 1195 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 FLRT1Q9NZU1 646 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 CLIP2Q9UDT6 1046 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 SALL3Q9BXA9 1300 aa11.52□□□□□ -0.57
TARDBP-218ENST00000617172 IGKV6D-41A0A0C4DH26 115 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 TTLL1O95922 423 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 TSPY3P0CV98 308 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 TSPY8P0CW00 308 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 CNGA1P29973 690 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 MNX1P50219 401 aaPredicted RBP11.51□□□□□ -0.57
TARDBP-218ENST00000617172 PPARAQ07869 468 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 FAM83BQ5T0W9 1011 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 CHRDL2Q6WN34 429 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 STK11IPQ8N1F8 1099 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 NEDD1Q8NHV4 660 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 SLF1Q9BQI6 1058 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 HELLSQ9NRZ9 838 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 FBXO28Q9NVF7 368 aa11.51□□□□□ -0.57
TARDBP-218ENST00000617172 DDX20Q9UHI6 824 aaKnown RBP11.51□□□□□ -0.57
TARDBP-218ENST00000617172 DIS3Q9Y2L1 958 aaKnown RBP11.51□□□□□ -0.57
TARDBP-218ENST00000617172 A0A1W2PPC1 479 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 ATP2A1O14983 1001 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 COBLO75128 1261 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 ZBED4O75132 1171 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 PRDM1O75626 825 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 FDX1P10109 184 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 COL6A1P12109 1028 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 CYP2C19P33261 490 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 FXR1P51114 621 aaKnown RBP eCLIP11.5□□□□□ -0.57
TARDBP-218ENST00000617172 TFAP4Q01664 338 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 KCTD2Q14681 263 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 ARRDC4Q8NCT1 418 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 GMCL1P1Q8NEA9 526 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 CEP95Q96GE4 821 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 TEX13BQ9BXU2 312 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 NRBP1Q9UHY1 535 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 FEM1BQ9UK73 627 aa11.5□□□□□ -0.57
TARDBP-218ENST00000617172 CTDP1Q9Y5B0 961 aaPredicted RBP11.5□□□□□ -0.57
TARDBP-218ENST00000617172 SEPT4O43236 478 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 NDUFB10O96000 172 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 CYBAP13498 195 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 ALX1Q15699 326 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 MCMDC2Q4G0Z9 681 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 SMC5Q8IY18 1101 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 MAML3Q96JK9 1138 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 MMP19Q99542 508 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 PRO3102Q9H379 93 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 RBM27Q9P2N5 1060 aaKnown RBP11.49□□□□□ -0.57
TARDBP-218ENST00000617172 ANAPC4Q9UJX5 808 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 ZNF214Q9UL59 606 aaPredicted RBP11.49□□□□□ -0.57
TARDBP-218ENST00000617172 PLXNB2O15031 1838 aa11.49□□□□□ -0.57
TARDBP-218ENST00000617172 TSPY2A6NKD2 308 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 DNM1LO00429 736 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 BMP8BP34820 402 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 C7orf61Q8IZ16 206 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 MSL3Q8N5Y2 521 aaKnown RBP11.48□□□□□ -0.57
TARDBP-218ENST00000617172 REPS2Q8NFH8 660 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 CHURC1Q8WUH1 139 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 NUP88Q99567 741 aaPredicted RBP11.48□□□□□ -0.57
TARDBP-218ENST00000617172 PLIN4Q96Q06 1357 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 MYH7P12883 1935 aa11.48□□□□□ -0.57
TARDBP-218ENST00000617172 BAZ2AQ9UIF9 1905 aaKnown RBP11.48□□□□□ -0.57
TARDBP-218ENST00000617172 PFASO15067 1338 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 TRIM6-TRIM34B2RNG4 842 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 PLA2G6O60733 806 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 BMP3P12645 472 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 OAZ1P54368 228 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 MFAP1P55081 439 aaKnown RBP11.47□□□□□ -0.57
TARDBP-218ENST00000617172 ZNF792Q3KQV3 632 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 FAM47AQ5JRC9 791 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 SLFN13Q68D06 897 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 SNRNP48Q6IEG0 339 aaKnown RBP11.47□□□□□ -0.57
TARDBP-218ENST00000617172 CHD1LQ86WJ1 897 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 DDX11Q96FC9 970 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 GMCL1Q96IK5 515 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 TINF2Q9BSI4 451 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 LNPKQ9C0E8 428 aa11.47□□□□□ -0.57
TARDBP-218ENST00000617172 SENP6Q9GZR1 1112 aaPredicted RBP11.47□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 56.3 ms