RNA–Protein interactions for RNA: ENST00000613524.4

SYCP1-209, Transcript of synaptonemal complex protein 1, humanhuman

TSL 1 (best) BASIC

Gene SYCP1, Length 3,034 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYCP1-209ENST00000613524 SPP2Q13103 211 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 FAM26DQ5JW98 314 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 SH3BP5LQ7L8J4 393 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 DNAJC5GQ8N7S2 189 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 PIBF1Q8WXW3 757 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 SAP130Q9H0E3 1048 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 PICK1Q9NRD5 415 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 DIAPH3Q9NSV4 1193 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 DMGDHQ9UI17 866 aaKnown RBP5.9□□□□□ -1.46
SYCP1-209ENST00000613524 NAP1L2Q9ULW6 460 aaPredicted RBP5.9□□□□□ -1.46
SYCP1-209ENST00000613524 PCDHB9Q9Y5E1 797 aa5.9□□□□□ -1.46
SYCP1-209ENST00000613524 MAST3O60307 1309 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 M0R2C6 588 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 PPFIA3O75145 1194 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 USP2O75604 605 aaPredicted RBP5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CFHP08603 1231 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CYP2C8P10632 490 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 PDE1AP54750 535 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 GSTO1P78417 241 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 NFKBIBQ15653 356 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CCDC144BQ3MJ40 725 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 FAM47AQ5JRC9 791 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 ATCAYQ86WG3 371 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 RAB11FIP4Q86YS3 637 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CLP1Q92989 425 aaKnown RBP5.9□□□□□ -1.47
SYCP1-209ENST00000613524 OSBP2Q969R2 916 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 KCNK17Q96T54 332 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 PAGR1Q9BTK6 254 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 DDX24Q9GZR7 859 aaKnown RBP eCLIP5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CAPN10Q9HC96 672 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 MYH2Q9UKX2 1941 aa5.9□□□□□ -1.47
SYCP1-209ENST00000613524 CCL15-CCL14A0A0B4J2E2 113 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 ZBBXA8MT70 800 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 ERC2O15083 957 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 MARCH6O60337 910 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 DKK1O94907 266 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 SLC34A2O95436 690 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 GH2P01242 217 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 HMGCS2P54868 508 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 NR1H3Q13133 447 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 CCL15Q16663 113 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 TBCELQ5QJ74 424 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 TMC7Q7Z402 723 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 UBXN4Q92575 508 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 ZKSCAN3Q9BRR0 538 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 KIAA1468Q9P260 1216 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 PRKAG2Q9UGJ0 569 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 LRRC37AA6NMS7 1700 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 FLT1P17948 1338 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 A0A0D9SFI3 127 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 CCDC85CA6NKD9 419 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 GPAA1O43292 621 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 RHBDL3P58872 404 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 IKQ13123 557 aaPredicted RBP5.89□□□□□ -1.47
SYCP1-209ENST00000613524 PPP1R3FQ6ZSY5 799 aaPredicted RBP5.89□□□□□ -1.47
SYCP1-209ENST00000613524 CHST3Q7LGC8 479 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 METTL16Q86W50 562 aaKnown RBP5.89□□□□□ -1.47
SYCP1-209ENST00000613524 TMEM87AQ8NBN3 555 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 MKNK2Q9HBH9 465 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 PRDM9Q9NQV7 894 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 CPA4Q9UI42 421 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 CNTNAP1P78357 1384 aa5.89□□□□□ -1.47
SYCP1-209ENST00000613524 RANBP6O60518 1105 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 GJA5P36382 358 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ECE1P42892 770 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 NMIQ13287 307 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 PLS1Q14651 629 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 RRP1BQ14684 758 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 RASGRP2Q7LDG7 609 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 MICAL1Q8TDZ2 1067 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 SMCR8Q8TEV9 937 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 TEPSINQ96N21 525 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 CRNKL1Q9BZJ0 848 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 TLL2Q9Y6L7 1015 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 GLRX3O76003 335 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 HLA-DOAP06340 250 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ATP5JP18859 108 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 JAG1P78504 1218 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 TAF1CQ15572 869 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 HHIPL2Q6UWX4 724 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 C15orf52Q6ZUT6 534 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ZNF589Q86UQ0 364 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 RASAL3Q86YV0 1011 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 HAUS7Q99871 368 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ZNF341Q9BYN7 854 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 OSBPL5Q9H0X9 879 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 RBAK-RBAKDNI3L0D1 243 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ICMTO60725 284 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 CTHP32929 405 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 SNAP25P60880 206 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ELOAQ14241 798 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 BMS1Q14692 1282 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 TTF1Q15361 905 aaPredicted RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 NOL8Q76FK4 1167 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 PLEKHM2Q8IWE5 1019 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 CCAR1Q8IX12 1150 aaKnown RBP5.88□□□□□ -1.47
SYCP1-209ENST00000613524 ANKRD13AQ8IZ07 590 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 FAM151AQ8WW52 585 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 GCC1Q96CN9 775 aa5.88□□□□□ -1.47
SYCP1-209ENST00000613524 NUP88Q99567 741 aaPredicted RBP5.88□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms