RNA–Protein interactions for RNA: ENST00000612337.4

SSBP1-215, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SSBP1, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-215ENST00000612337 SAMD1Q6SPF0 538 aaPredicted RBP21.3■■□□□ 1
SSBP1-215ENST00000612337 APPBP2Q92624 585 aa21.3■■□□□ 1
SSBP1-215ENST00000612337 OSBP2Q969R2 916 aa21.3■■□□□ 1
SSBP1-215ENST00000612337 LRCH3Q96II8 777 aa21.3■■□□□ 1
SSBP1-215ENST00000612337 GNL3Q9BVP2 549 aaKnown RBP eCLIP21.3■■□□□ 1
SSBP1-215ENST00000612337 SENP6Q9GZR1 1112 aaPredicted RBP21.3■■□□□ 1
SSBP1-215ENST00000612337 LAMA2P24043 3122 aaKnown RBP21.3■■□□□ 1
SSBP1-215ENST00000612337 COL11A1P12107 1806 aaPredicted RBP21.29■■□□□ 1
SSBP1-215ENST00000612337 ROBO3Q96MS0 1386 aa21.29■■□□□ 1
SSBP1-215ENST00000612337 DNM1LO00429 736 aa21.29■■□□□ 1
SSBP1-215ENST00000612337 TSHZ3Q63HK5 1081 aa21.29■■□□□ 1
SSBP1-215ENST00000612337 FBXO28Q9NVF7 368 aa21.29■■□□□ 1
SSBP1-215ENST00000612337 ZNFX1Q9P2E3 1918 aaKnown RBP21.28■■□□□ 1
SSBP1-215ENST00000612337 SEPT4O43236 478 aa21.28■■□□□ 1
SSBP1-215ENST00000612337 ZFYP08048 801 aaPredicted RBP21.28■■□□□ 1
SSBP1-215ENST00000612337 FCER1AP12319 257 aa21.28■■□□□ 1
SSBP1-215ENST00000612337 RASA1P20936 1047 aa21.28■■□□□ 1
SSBP1-215ENST00000612337 TDHQ8IZJ6 230 aa21.28■■□□□ 1
SSBP1-215ENST00000612337 PPP1R9AQ9ULJ8 1098 aa21.28■■□□□ 1
SSBP1-215ENST00000612337 MINDY4BA8MYZ0 360 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 VWA5AO00534 786 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 GPAA1O43292 621 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 GNAT2P19087 354 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 FAM83BQ5T0W9 1011 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 RIOX2Q8IUF8 465 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 MAML3Q96JK9 1138 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 MKNK2Q9HBH9 465 aa21.27■■□□□ 1
SSBP1-215ENST00000612337 RAD21O60216 631 aa21.26■□□□□ 0.99
SSBP1-215ENST00000612337 STAT3P40763 770 aa21.26■□□□□ 0.99
SSBP1-215ENST00000612337 LRRFIP1Q32MZ4 808 aaKnown RBP21.26■□□□□ 0.99
SSBP1-215ENST00000612337 ARRDC4Q8NCT1 418 aa21.26■□□□□ 0.99
SSBP1-215ENST00000612337 UBE2OQ9C0C9 1292 aaKnown RBP21.26■□□□□ 0.99
SSBP1-215ENST00000612337 EPB41L4AQ9HCS5 686 aaPredicted RBP21.26■□□□□ 0.99
SSBP1-215ENST00000612337 NYAP2Q9P242 653 aa21.26■□□□□ 0.99
SSBP1-215ENST00000612337 TTC41PQ6P2S7 1318 aa21.26■□□□□ 0.99
SSBP1-215ENST00000612337 COPB2P35606 906 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 LRIT3Q3SXY7 679 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 GPR153Q6NV75 609 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 STK11IPQ8N1F8 1099 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 REPS2Q8NFH8 660 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 MMP19Q99542 508 aa21.25■□□□□ 0.99
SSBP1-215ENST00000612337 ZNF214Q9UL59 606 aaPredicted RBP21.25■□□□□ 0.99
SSBP1-215ENST00000612337 M0R2C6 588 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 TDO2P48775 406 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 ATN1P54259 1190 aaPredicted RBP21.24■□□□□ 0.99
SSBP1-215ENST00000612337 KCTD2Q14681 263 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 PRAMEF19Q5SWL8 479 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 GJC2Q5T442 439 aaPredicted RBP21.24■□□□□ 0.99
SSBP1-215ENST00000612337 ANO1Q5XXA6 986 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 SLF1Q9BQI6 1058 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 ZNF287Q9HBT7 754 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 NRBP1Q9UHY1 535 aa21.24■□□□□ 0.99
SSBP1-215ENST00000612337 PATL2C9JE40 543 aaKnown RBP21.23■□□□□ 0.99
SSBP1-215ENST00000612337 KBTBD13C9JR72 458 aa21.23■□□□□ 0.99
SSBP1-215ENST00000612337 F5H6K3 240 aa21.23■□□□□ 0.99
SSBP1-215ENST00000612337 ERC2O15083 957 aa21.23■□□□□ 0.99
SSBP1-215ENST00000612337 MDM2Q00987 491 aaPredicted RBP21.23■□□□□ 0.99
SSBP1-215ENST00000612337 KLRC3Q07444 240 aa21.23■□□□□ 0.99
SSBP1-215ENST00000612337 NUP88Q99567 741 aaPredicted RBP21.23■□□□□ 0.99
SSBP1-215ENST00000612337 DIS3Q9Y2L1 958 aaKnown RBP21.23■□□□□ 0.99
SSBP1-215ENST00000612337 PCDHB15Q9Y5E8 787 aa21.23■□□□□ 0.99
SSBP1-215ENST00000612337 IGKV6D-41A0A0C4DH26 115 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 NDUFB10O96000 172 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 APPP05067 770 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 RTP1P59025 263 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 ZNF792Q3KQV3 632 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 ZNF444Q8N0Y2 327 aaPredicted RBP21.22■□□□□ 0.99
SSBP1-215ENST00000612337 PI4K2BQ8TCG2 481 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 TINF2Q9BSI4 451 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 PLXNA1Q9UIW2 1896 aa21.22■□□□□ 0.99
SSBP1-215ENST00000612337 A0A0C4DFX4 3053 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 SMCHD1A6NHR9 2005 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 PGK2P07205 417 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 IFNL3Q8IZI9 196 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 MKL1Q969V6 931 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 TEX13BQ9BXU2 312 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 CLIP2Q9UDT6 1046 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 MYH4Q9Y623 1939 aa21.21■□□□□ 0.99
SSBP1-215ENST00000612337 PRDM1O75626 825 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 LRRC41Q15345 812 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 FAM47AQ5JRC9 791 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 SLC39A5Q6ZMH5 540 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 PRPF38AQ8NAV1 312 aaKnown RBP21.2■□□□□ 0.98
SSBP1-215ENST00000612337 OTUD7AQ8TE49 926 aaPredicted RBP21.2■□□□□ 0.98
SSBP1-215ENST00000612337 NACAP1Q9BZK3 213 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 SYNPO2Q9UMS6 1093 aa21.2■□□□□ 0.98
SSBP1-215ENST00000612337 SNRNP48Q6IEG0 339 aaKnown RBP21.19■□□□□ 0.98
SSBP1-215ENST00000612337 CEP95Q96GE4 821 aa21.19■□□□□ 0.98
SSBP1-215ENST00000612337 SEC62Q99442 399 aaKnown RBP21.19■□□□□ 0.98
SSBP1-215ENST00000612337 LBHD1Q9BQE6 289 aaPredicted RBP21.19■□□□□ 0.98
SSBP1-215ENST00000612337 FSD1Q9BTV5 496 aa21.19■□□□□ 0.98
SSBP1-215ENST00000612337 MTMR4Q9NYA4 1195 aa21.19■□□□□ 0.98
SSBP1-215ENST00000612337 PRKAG2Q9UGJ0 569 aa21.19■□□□□ 0.98
SSBP1-215ENST00000612337 ATP11BQ9Y2G3 1177 aa21.19■□□□□ 0.98
SSBP1-215ENST00000612337 ATP2A1O14983 1001 aa21.18■□□□□ 0.98
SSBP1-215ENST00000612337 TTLL1O95922 423 aa21.18■□□□□ 0.98
SSBP1-215ENST00000612337 MYCNP04198 464 aaPredicted RBP21.18■□□□□ 0.98
SSBP1-215ENST00000612337 RARBP10826 455 aa21.18■□□□□ 0.98
SSBP1-215ENST00000612337 SNX17Q15036 470 aa21.18■□□□□ 0.98
SSBP1-215ENST00000612337 ZMYM1Q5SVZ6 1142 aa21.18■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 76.1 ms