RNA–Protein interactions for RNA: ENST00000606715.3

SHANK2-219, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

Gene SHANK2, Length 5,738 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-219ENST00000606715 UIMC1Q96RL1 719 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CLSTN2Q9H4D0 955 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 ESYT2A0FGR8 921 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CTAGE15A4D2H0 777 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CAPN9O14815 690 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 EXOC3O60645 756 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CTAGE8P0CG41 777 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 BCAMP50895 628 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CTDSPL2Q05D32 466 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CERKLQ49MI3 558 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 VWA3BQ502W6 1294 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CDC37L1Q7L3B6 337 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CTAGE6Q86UF2 777 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CTAGE4Q8IX94 777 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 TRMT2AQ8IZ69 625 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 REXO1Q8N1G1 1221 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 SNX29Q8TEQ0 813 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 PPANQ9NQ55 473 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 RIMS1Q86UR5 1692 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 CETN3O15182 167 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 XPAP23025 273 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 SKIV2LQ15477 1246 aaKnown RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 ANO6Q4KMQ2 910 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 SND1Q7KZF4 910 aaKnown RBP eCLIP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 DDAH1O94760 285 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 FMNL1O95466 1100 aaPredicted RBP12.23□□□□□ -0.45
SHANK2-219ENST00000606715 SUGCTQ9HAC7 445 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 LRWD1Q9UFC0 647 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 STAP2Q9UGK3 403 aa12.23□□□□□ -0.45
SHANK2-219ENST00000606715 KIF11P52732 1056 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 RNASELQ05823 741 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 FAM102BQ5T8I3 360 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 ZSCAN10Q96SZ4 725 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 NOL12Q9UGY1 213 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 V9GYY5 206 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 KDM2BQ8NHM5 1336 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 GRAPQ13588 217 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 FAM160B1Q5W0V3 765 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 C4orf50Q6ZRC1 276 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 TPH2Q8IWU9 490 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 GPR161Q8N6U8 529 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 GRAPLQ8TC17 118 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 NT5C3AQ9H0P0 336 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 TYW5A2RUC4 315 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 CLUL1Q15846 466 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 DHX36Q9H2U1 1008 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 IRX5P78411 483 aaPredicted RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 ITIH3Q06033 890 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 NOP9Q86U38 636 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 AOPEPQ8N6M6 819 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 SELENOSQ9BQE4 189 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 NOC4LQ9BVI4 516 aaKnown RBP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 PLEKHG2Q9H7P9 1386 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 SETBP1Q9Y6X0 1596 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 POLR2MP0CAP2 368 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 GTF2F1P35269 517 aaKnown RBP eCLIP12.22□□□□□ -0.45
SHANK2-219ENST00000606715 USP14P54578 494 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 CALCRLQ16602 461 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 ZNF569Q5MCW4 686 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 ZNF654Q8IZM8 581 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 C2orf69Q8N8R5 385 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 PPP1R9BQ96SB3 815 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 MMS19Q96T76 1030 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 NUB1Q9Y5A7 615 aa12.22□□□□□ -0.45
SHANK2-219ENST00000606715 CEP170BQ9Y4F5 1589 aaPredicted RBP12.21□□□□□ -0.45
SHANK2-219ENST00000606715 SMIM23A6NLE4 172 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 GCNT3O95395 438 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 VIMP08670 466 aaKnown RBP12.21□□□□□ -0.45
SHANK2-219ENST00000606715 IREB2P48200 963 aaKnown RBP12.21□□□□□ -0.45
SHANK2-219ENST00000606715 LRRC24Q50LG9 513 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 AFAP1L2Q8N4X5 818 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 SLC10A4Q96EP9 437 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 NRBP2Q9NSY0 501 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 NARFQ9UHQ1 456 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 DLC1Q96QB1 1528 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 TNNC2P02585 160 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 Q3C1V9 767 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 SRGAP1Q7Z6B7 1085 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 IWS1Q96ST2 819 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 MRPL44Q9H9J2 332 aaKnown RBP12.21□□□□□ -0.45
SHANK2-219ENST00000606715 USTQ9Y2C2 406 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 TRPM1Q7Z4N2 1603 aa12.21□□□□□ -0.45
SHANK2-219ENST00000606715 DYNC1I1O14576 645 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 KCNA4P22459 653 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 HERC4Q5GLZ8 1057 aaPredicted RBP12.21□□□□□ -0.46
SHANK2-219ENST00000606715 LUC7L2Q9Y383 392 aaKnown RBP12.21□□□□□ -0.46
SHANK2-219ENST00000606715 ATP2C2O75185 946 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 ICA1Q05084 483 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 ST7Q9NRC1 585 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 MED14O60244 1454 aa12.21□□□□□ -0.46
SHANK2-219ENST00000606715 CLRN2A0PK11 232 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 FOSP01100 380 aaPredicted RBP12.2□□□□□ -0.46
SHANK2-219ENST00000606715 ERFEQ4G0M1 354 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 MUM1L1Q5H9M0 696 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 GPATCH4Q5T3I0 446 aaKnown RBP12.2□□□□□ -0.46
SHANK2-219ENST00000606715 COA1Q9GZY4 146 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 CALCOCO1Q9P1Z2 691 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 DIP2AQ14689 1571 aa12.2□□□□□ -0.46
SHANK2-219ENST00000606715 FRMPD1Q5SYB0 1578 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms