RNA–Protein interactions for RNA: ENST00000601444.2

SSBP4-210, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 427 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-210ENST00000601444 PPP4R3BQ5MIZ7 849 aa23.65■■□□□ 1.38
SSBP4-210ENST00000601444 CNNM2Q9H8M5 875 aa23.65■■□□□ 1.38
SSBP4-210ENST00000601444 RABGAP1Q9Y3P9 1069 aa23.65■■□□□ 1.38
SSBP4-210ENST00000601444 RLFQ13129 1914 aa23.65■■□□□ 1.38
SSBP4-210ENST00000601444 ARHGEF6Q15052 776 aa23.64■■□□□ 1.37
SSBP4-210ENST00000601444 CREB3L3Q68CJ9 461 aa23.64■■□□□ 1.37
SSBP4-210ENST00000601444 FBXO46Q6PJ61 603 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-210ENST00000601444 GTF3C2Q8WUA4 911 aaPredicted RBP23.64■■□□□ 1.37
SSBP4-210ENST00000601444 ABHD8Q96I13 439 aa23.64■■□□□ 1.37
SSBP4-210ENST00000601444 PORCNQ9H237 461 aa23.64■■□□□ 1.37
SSBP4-210ENST00000601444 GABRQQ9UN88 632 aa23.64■■□□□ 1.37
SSBP4-210ENST00000601444 TOP1P11387 765 aaKnown RBP23.63■■□□□ 1.37
SSBP4-210ENST00000601444 BMP3P12645 472 aa23.63■■□□□ 1.37
SSBP4-210ENST00000601444 TTC14Q96N46 770 aa23.63■■□□□ 1.37
SSBP4-210ENST00000601444 ZSCAN10Q96SZ4 725 aaPredicted RBP23.63■■□□□ 1.37
SSBP4-210ENST00000601444 PTCH2Q9Y6C5 1203 aa23.63■■□□□ 1.37
SSBP4-210ENST00000601444 TNPO2O14787 897 aaKnown RBP23.62■■□□□ 1.37
SSBP4-210ENST00000601444 PRKCZQ05513 592 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 TRDNQ13061 729 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 COL9A3Q14050 684 aaPredicted RBP23.62■■□□□ 1.37
SSBP4-210ENST00000601444 KCTD1Q719H9 257 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 CHST3Q7LGC8 479 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 IQCA1Q86XH1 822 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 GMCL1Q96IK5 515 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 SRRDQ9UH36 339 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 PPP1R9AQ9ULJ8 1098 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 ADAMTS5Q9UNA0 930 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 HPS5Q9UPZ3 1129 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 HTTP42858 3142 aa23.62■■□□□ 1.37
SSBP4-210ENST00000601444 GNRH1P01148 92 aa23.61■■□□□ 1.37
SSBP4-210ENST00000601444 SLC1A4P43007 532 aa23.61■■□□□ 1.37
SSBP4-210ENST00000601444 DGKHQ86XP1 1220 aa23.61■■□□□ 1.37
SSBP4-210ENST00000601444 ENAHQ8N8S7 591 aaPredicted RBP23.61■■□□□ 1.37
SSBP4-210ENST00000601444 SLF1Q9BQI6 1058 aa23.61■■□□□ 1.37
SSBP4-210ENST00000601444 ISY1Q9ULR0 285 aaKnown RBP23.61■■□□□ 1.37
SSBP4-210ENST00000601444 TNKSO95271 1327 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 MYPNQ86TC9 1320 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 TMEM232C9JQI7 657 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 VWA5AO00534 786 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 NT5C2P49902 561 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 TMEM132BQ14DG7 1078 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 NCOA7Q8NI08 942 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 KIFC2Q96AC6 838 aa23.6■■□□□ 1.37
SSBP4-210ENST00000601444 HOXD10P28358 340 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 PLS1Q14651 629 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 RALYLQ86SE5 291 aaKnown RBP23.59■■□□□ 1.37
SSBP4-210ENST00000601444 ANKS1AQ92625 1134 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 UBAC1Q9BSL1 405 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 MOV10L1Q9BXT6 1211 aaKnown RBP23.59■■□□□ 1.37
SSBP4-210ENST00000601444 SPATC1LQ9H0A9 340 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 FEM1BQ9UK73 627 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 PARP14Q460N5 1801 aa23.59■■□□□ 1.37
SSBP4-210ENST00000601444 MGAMO43451 1857 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 FLT3LGP49771 235 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 ANTXR2P58335 489 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 SEC23AQ15436 765 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 CCDC178Q5BJE1 867 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 TTBK2Q6IQ55 1244 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 MB21D2Q8IYB1 491 aaPredicted RBP23.58■■□□□ 1.37
SSBP4-210ENST00000601444 RASEFQ8IZ41 740 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 MB21D1Q8N884 522 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 PRPF38AQ8NAV1 312 aaKnown RBP23.58■■□□□ 1.37
SSBP4-210ENST00000601444 REPS2Q8NFH8 660 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 COA7Q96BR5 231 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 A0A0G2JMZ2 1700 aa23.58■■□□□ 1.37
SSBP4-210ENST00000601444 FRMPD2Q68DX3 1309 aaPredicted RBP23.58■■□□□ 1.36
SSBP4-210ENST00000601444 PDHBP11177 359 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 MAPK4P31152 587 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 CCDC96Q2M329 555 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 GPR142Q7Z601 462 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 CCAR1Q8IX12 1150 aaKnown RBP23.57■■□□□ 1.36
SSBP4-210ENST00000601444 DCAF4Q8WV16 495 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 KAT14Q9H8E8 782 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 SENP2Q9HC62 589 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 GPCPD1Q9NPB8 672 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 GJD2Q9UKL4 321 aa23.57■■□□□ 1.36
SSBP4-210ENST00000601444 STAT2P52630 851 aa23.56■■□□□ 1.36
SSBP4-210ENST00000601444 PRMT2P55345 433 aa23.56■■□□□ 1.36
SSBP4-210ENST00000601444 CCNA1P78396 465 aa23.56■■□□□ 1.36
SSBP4-210ENST00000601444 WDR78Q5VTH9 848 aa23.56■■□□□ 1.36
SSBP4-210ENST00000601444 PNMA1Q8ND90 353 aa23.56■■□□□ 1.36
SSBP4-210ENST00000601444 IFIT3O14879 490 aaKnown RBP23.55■■□□□ 1.36
SSBP4-210ENST00000601444 SLC16A2P36021 539 aa23.55■■□□□ 1.36
SSBP4-210ENST00000601444 SNAP25P60880 206 aa23.55■■□□□ 1.36
SSBP4-210ENST00000601444 IKQ13123 557 aaPredicted RBP23.55■■□□□ 1.36
SSBP4-210ENST00000601444 IFIT1BQ5T764 474 aaKnown RBP23.55■■□□□ 1.36
SSBP4-210ENST00000601444 PLEKHH3Q7Z736 793 aa23.55■■□□□ 1.36
SSBP4-210ENST00000601444 RAET1EQ8TD07 263 aa23.55■■□□□ 1.36
SSBP4-210ENST00000601444 SH3TC2Q8TF17 1288 aa23.55■■□□□ 1.36
SSBP4-210ENST00000601444 GPHNQ9NQX3 736 aaPredicted RBP23.55■■□□□ 1.36
SSBP4-210ENST00000601444 ZNF214Q9UL59 606 aaPredicted RBP23.55■■□□□ 1.36
SSBP4-210ENST00000601444 CAPN15O75808 1086 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 GOLGA8HP0CJ92 632 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 SNHG28P0DPA3 235 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 ERCC3P19447 782 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 ADCK5Q3MIX3 580 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 RNF20Q5VTR2 975 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 CHURC1Q8WUH1 139 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 CENPFP49454 3210 aa23.54■■□□□ 1.36
SSBP4-210ENST00000601444 CCDC85CA6NKD9 419 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms