RNA–Protein interactions for RNA: ENST00000596163.5

SHKBP1-212, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 785 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-212ENST00000596163 FEM1BQ9UK73 627 aa20.36■□□□□ 0.85
SHKBP1-212ENST00000596163 PTCH2Q9Y6C5 1203 aa20.36■□□□□ 0.85
SHKBP1-212ENST00000596163 GREB1LQ9C091 1923 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 NEDD4P46934 1319 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 KDM4AO75164 1064 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 BMP3P12645 472 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 SLC1A4P43007 532 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 SLC9C1Q4G0N8 1177 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 DGKHQ86XP1 1220 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 PRPF38AQ8NAV1 312 aaKnown RBP20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 PPP1R9AQ9ULJ8 1098 aa20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 CTDP1Q9Y5B0 961 aaPredicted RBP20.35■□□□□ 0.85
SHKBP1-212ENST00000596163 B4E1Z4 1266 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 CNMDO75829 334 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 CYP21A2P08686 494 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 PRKCZQ05513 592 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 CHURC1Q8WUH1 139 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 ATG4CQ96DT6 458 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 NUP88Q99567 741 aaPredicted RBP20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 LSG1Q9H089 658 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 ANO2Q9NQ90 1003 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 BTBD7Q9P203 1132 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 ISY1Q9ULR0 285 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 ADAMTS5Q9UNA0 930 aa20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 RBM8AQ9Y5S9 174 aaKnown RBP20.34■□□□□ 0.85
SHKBP1-212ENST00000596163 FDX1P10109 184 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 FLT3LGP49771 235 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 IRF5Q13568 498 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 PLS1Q14651 629 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 RCSD1Q6JBY9 416 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 POTEEQ6S8J3 1075 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 PLEKHH3Q7Z736 793 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 RALYLQ86SE5 291 aaKnown RBP20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 FAM160B2Q86V87 743 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 DCAF4Q8WV16 495 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 NUDT12Q9BQG2 462 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 TMEM47Q9BQJ4 181 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 UBAC1Q9BSL1 405 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 SPATC1LQ9H0A9 340 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 ZSWIM5Q9P217 1185 aa20.33■□□□□ 0.85
SHKBP1-212ENST00000596163 VWA5AO00534 786 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 PEX10O60683 326 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 ZBED4O75132 1171 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 MCCP23508 829 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 WDR78Q5VTH9 848 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 SLAIN1Q8ND83 568 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 SHCBP1Q8NEM2 672 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 SOCS4Q8WXH5 440 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 ARMC5Q96C12 935 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 ZSCAN10Q96SZ4 725 aaPredicted RBP20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 PORCNQ9H237 461 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 FBXO28Q9NVF7 368 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 GABRQQ9UN88 632 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 IVNS1ABPQ9Y6Y0 642 aa20.32■□□□□ 0.84
SHKBP1-212ENST00000596163 TMEM232C9JQI7 657 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 PLA2G6O60733 806 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 SLC25A27O95847 323 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 GRK4P32298 578 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 COPB2P35606 906 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 STAT2P52630 851 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 IKQ13123 557 aaPredicted RBP20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 RNF20Q5VTR2 975 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 GPR142Q7Z601 462 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 NCOA7Q8NI08 942 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 PXYLP1Q8TE99 480 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 ANKS1AQ92625 1134 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 KIFC2Q96AC6 838 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 ZKSCAN3Q9BRR0 538 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 MOV10L1Q9BXT6 1211 aaKnown RBP20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 MROH8Q9H579 483 aa20.31■□□□□ 0.84
SHKBP1-212ENST00000596163 E7EWF7 191 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 STRNO43815 780 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 ADCY3O60266 1144 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 UBXN2AP68543 259 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 KAT14Q9H8E8 782 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 BIN2Q9UBW5 565 aaPredicted RBP20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 GJD2Q9UKL4 321 aa20.3■□□□□ 0.84
SHKBP1-212ENST00000596163 ERICH2A1L162 156 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 SLC15A5A6NIM6 579 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 STAT3P40763 770 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 RGS2P41220 211 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 TMEM132BQ14DG7 1078 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 SART3Q15020 963 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 CCDC96Q2M329 555 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 NCAPG2Q86XI2 1143 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 TRMT44Q8IYL2 757 aaKnown RBP20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 MTMR7Q9Y216 660 aa20.29■□□□□ 0.84
SHKBP1-212ENST00000596163 ERCC3P19447 782 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 PTPREP23469 700 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 NECTIN1Q15223 517 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 KCTD1Q719H9 257 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 RIOX2Q8IUF8 465 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 SH3TC2Q8TF17 1288 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 TMEM106CQ9BVX2 250 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 TEX13BQ9BXU2 312 aa20.28■□□□□ 0.84
SHKBP1-212ENST00000596163 TNKSO95271 1327 aa20.27■□□□□ 0.84
SHKBP1-212ENST00000596163 SLC27A2O14975 620 aa20.27■□□□□ 0.84
SHKBP1-212ENST00000596163 XRCC5P13010 732 aaKnown RBP20.27■□□□□ 0.84
SHKBP1-212ENST00000596163 OAZ1P54368 228 aa20.27■□□□□ 0.84
SHKBP1-212ENST00000596163 MORN1Q5T089 497 aa20.27■□□□□ 0.84
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms