RNA–Protein interactions for RNA: ENST00000595726.1

SHKBP1-208, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 684 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-208ENST00000595726 ADAMTS4O75173 837 aa16.78■□□□□ 0.28
SHKBP1-208ENST00000595726 ABRAQ8N0Z2 381 aa16.78■□□□□ 0.28
SHKBP1-208ENST00000595726 MICALL1Q8N3F8 863 aa16.78■□□□□ 0.28
SHKBP1-208ENST00000595726 LRFN3Q9BTN0 628 aa16.78■□□□□ 0.28
SHKBP1-208ENST00000595726 FOCADQ5VW36 1801 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 ZNF865P0CJ78 1059 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 DSG3P32926 999 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 KCNQ1P51787 676 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 G3BP1Q13283 466 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 PPIGQ13427 754 aaKnown RBP eCLIP16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 MTX1Q13505 466 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 KCNA10Q16322 511 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 TINF2Q9BSI4 451 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 EHD4Q9H223 541 aa16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 CXXC1Q9P0U4 656 aaPredicted RBP16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 YBX2Q9Y2T7 364 aaKnown RBP16.77■□□□□ 0.28
SHKBP1-208ENST00000595726 PNMA6EA0A0J9YXQ4 647 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 MYADML2A6NDP7 307 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 MPHOSPH10O00566 681 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 TMEM132BQ14DG7 1078 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 TTC6Q86TZ1 520 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 SPICE1Q8N0Z3 855 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 PPP1R12CQ9BZL4 782 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 MSRAQ9UJ68 235 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 PIEZO1Q92508 2521 aa16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 MYO5AQ9Y4I1 1855 aaKnown RBP16.76■□□□□ 0.27
SHKBP1-208ENST00000595726 FLOT1O75955 427 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 HNRNPUQ00839 825 aaKnown RBP eCLIP16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 ZNF792Q3KQV3 632 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 CCDC158Q5M9N0 1113 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 MB21D1Q8N884 522 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 NUP133Q8WUM0 1156 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 MMP19Q99542 508 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 TSEN34Q9BSV6 310 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 API5Q9BZZ5 524 aaKnown RBP16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 SLC28A3Q9HAS3 691 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 NRBP1Q9UHY1 535 aa16.75■□□□□ 0.27
SHKBP1-208ENST00000595726 MYH1P12882 1939 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 SYNGAP1Q96PV0 1343 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 SYNRGQ9UMZ2 1314 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 APBB1O00213 710 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 IDH1O75874 414 aaKnown RBP16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 AKR1A1P14550 325 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 CYP2C18P33260 490 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 CDK7P50613 346 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 CCSAPQ6IQ19 270 aaPredicted RBP16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 CLEC10AQ8IUN9 316 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 SIAH1Q8IUQ4 282 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 TMEM199Q8N511 208 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 MAGEB6Q8N7X4 407 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 KLHDC9Q8NEP7 349 aa16.74■□□□□ 0.27
SHKBP1-208ENST00000595726 GNAI3P08754 354 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 MYOGP15173 224 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 RABGGTBP53611 331 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 RAB30Q15771 203 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 TNNI3KQ59H18 835 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 CCDC174Q6PII3 467 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 VTI1AQ96AJ9 217 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 TSPYL2Q9H2G4 693 aaPredicted RBP16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 FPGT-TNNI3KV9GXZ4 949 aa16.73■□□□□ 0.27
SHKBP1-208ENST00000595726 POLR3DP05423 398 aaPredicted RBP16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 RARSP54136 660 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 GABPAQ06546 454 aa16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 SKIV2LQ15477 1246 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 KHSRPQ92945 711 aaKnown RBP eCLIP16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 FBXO28Q9NVF7 368 aa16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 HCN4Q9Y3Q4 1203 aa16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 ZNFX1Q9P2E3 1918 aaKnown RBP16.72■□□□□ 0.27
SHKBP1-208ENST00000595726 A0A0G2JMZ2 1700 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 MOXD2PA6NHM9 499 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 RFXAPO00287 272 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 SLC25A27O95847 323 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 SNAI1O95863 264 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 KCTD2Q14681 263 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 PSRC1Q6PGN9 363 aaPredicted RBP16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 OTOP2Q7RTS6 562 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 HERVK_113Q902F9 699 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 GLT1D1Q96MS3 346 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 ANTXR1Q9H6X2 564 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 IL23AQ9NPF7 189 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 TLR7Q9NYK1 1049 aaKnown RBP16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 FAM184BQ9ULE4 1060 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 CNPY2Q9Y2B0 182 aa16.71■□□□□ 0.27
SHKBP1-208ENST00000595726 MUC6Q6W4X9 2439 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 FAM86C2PA6NEL3 165 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 ADCY6O43306 1168 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 FGBP02675 491 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 ASGR1P07306 291 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 CYP2D6P10635 497 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 TMEM31Q5JXX7 168 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 GPR108Q9NPR9 543 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 DIS3Q9Y2L1 958 aaKnown RBP16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 ARIH1Q9Y4X5 557 aaPredicted RBP16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 WDFY4Q6ZS81 3184 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 ELP1O95163 1332 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 UMODL1Q5DID0 1318 aa16.7■□□□□ 0.26
SHKBP1-208ENST00000595726 ARVCFO00192 962 aa16.69■□□□□ 0.26
SHKBP1-208ENST00000595726 C6orf222P0C671 652 aaPredicted RBP16.69■□□□□ 0.26
SHKBP1-208ENST00000595726 STAT3P40763 770 aa16.69■□□□□ 0.26
SHKBP1-208ENST00000595726 ALYREFQ86V81 257 aaKnown RBP16.69■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.5 ms