RNA–Protein interactions for RNA: ENST00000594298.5

SHKBP1-203, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 3

Gene SHKBP1, Length 716 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-203ENST00000594298 FCER1AP12319 257 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 ATN1P54259 1190 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 TMEM132BQ14DG7 1078 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 CTR9Q6PD62 1173 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 Q7L0L9 218 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 MAML3Q96JK9 1138 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 LBHD1Q9BQE6 289 aaPredicted RBP21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 MTMR10Q9NXD2 777 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 STXBP5LQ9Y2K9 1186 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 SLC4A4Q9Y6R1 1079 aa21.04■□□□□ 0.96
SHKBP1-203ENST00000594298 EEF2P13639 858 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-203ENST00000594298 RTP1P59025 263 aa21.03■□□□□ 0.96
SHKBP1-203ENST00000594298 GJC2Q5T442 439 aaPredicted RBP21.03■□□□□ 0.96
SHKBP1-203ENST00000594298 PUS7LQ9H0K6 701 aaKnown RBP21.03■□□□□ 0.96
SHKBP1-203ENST00000594298 NRBP1Q9UHY1 535 aa21.03■□□□□ 0.96
SHKBP1-203ENST00000594298 KBTBD13C9JR72 458 aa21.02■□□□□ 0.96
SHKBP1-203ENST00000594298 SNX17Q15036 470 aa21.02■□□□□ 0.96
SHKBP1-203ENST00000594298 SLC39A5Q6ZMH5 540 aa21.02■□□□□ 0.96
SHKBP1-203ENST00000594298 ECHDC1Q9NTX5 307 aa21.02■□□□□ 0.96
SHKBP1-203ENST00000594298 ARPP21Q9UBL0 812 aaPredicted RBP21.02■□□□□ 0.96
SHKBP1-203ENST00000594298 RIOX2Q8IUF8 465 aa21.01■□□□□ 0.95
SHKBP1-203ENST00000594298 GOPCQ9HD26 462 aa21.01■□□□□ 0.95
SHKBP1-203ENST00000594298 PRKAG2Q9UGJ0 569 aa21.01■□□□□ 0.95
SHKBP1-203ENST00000594298 PPP1R9AQ9ULJ8 1098 aa21.01■□□□□ 0.95
SHKBP1-203ENST00000594298 DIS3Q9Y2L1 958 aaKnown RBP21.01■□□□□ 0.95
SHKBP1-203ENST00000594298 VWA5AO00534 786 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 COPB2P35606 906 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 SBK1Q52WX2 424 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 PRAMEF19Q5SWL8 479 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 ANKRD45Q5TZF3 282 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 C1orf53Q5VUE5 145 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 FAM109BQ6ICB4 259 aaPredicted RBP21■□□□□ 0.95
SHKBP1-203ENST00000594298 STRBPQ96SI9 672 aaKnown RBP21■□□□□ 0.95
SHKBP1-203ENST00000594298 MMP19Q99542 508 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 GNL3Q9BVP2 549 aaKnown RBP eCLIP21■□□□□ 0.95
SHKBP1-203ENST00000594298 FBXO28Q9NVF7 368 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 COL6A3P12111 3177 aa21■□□□□ 0.95
SHKBP1-203ENST00000594298 DLL1O00548 723 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 LRRC41Q15345 812 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 ANO1Q5XXA6 986 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 GIMAP6Q6P9H5 292 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 REPS2Q8NFH8 660 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 ZNF214Q9UL59 606 aaPredicted RBP20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 ATP11BQ9Y2G3 1177 aa20.99■□□□□ 0.95
SHKBP1-203ENST00000594298 ROBO3Q96MS0 1386 aa20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 POTEB2H3BUK9 544 aa20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 STAT3P40763 770 aa20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 KCTD2Q14681 263 aa20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 FAM47AQ5JRC9 791 aa20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 SAMD1Q6SPF0 538 aaPredicted RBP20.98■□□□□ 0.95
SHKBP1-203ENST00000594298 ERC2O15083 957 aa20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 ZNF792Q3KQV3 632 aa20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 TRIM60Q495X7 471 aa20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 FAM83BQ5T0W9 1011 aa20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 BAZ2AQ9UIF9 1905 aaKnown RBP20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 PARP14Q460N5 1801 aa20.97■□□□□ 0.95
SHKBP1-203ENST00000594298 MYH8P13535 1937 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 GSG1L2A8MUP6 293 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 PGK2P07205 417 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 RARBP10826 455 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 RASA1P20936 1047 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 ADCYAP1R1P41586 468 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 KBTBD3Q8NAB2 608 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 TINF2Q9BSI4 451 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 NYAP2Q9P242 653 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 PHF24Q9UPV7 400 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 TTC41PQ6P2S7 1318 aa20.96■□□□□ 0.95
SHKBP1-203ENST00000594298 MYCNP04198 464 aaPredicted RBP20.95■□□□□ 0.94
SHKBP1-203ENST00000594298 MSL3Q8N5Y2 521 aaKnown RBP20.95■□□□□ 0.94
SHKBP1-203ENST00000594298 APPBP2Q92624 585 aa20.95■□□□□ 0.94
SHKBP1-203ENST00000594298 XPNPEP3Q9NQH7 507 aa20.95■□□□□ 0.94
SHKBP1-203ENST00000594298 IRX6P78412 446 aaPredicted RBP20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 SMC5Q8IY18 1101 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 OSBP2Q969R2 916 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 SLF1Q9BQI6 1058 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 TEX13BQ9BXU2 312 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 MKNK2Q9HBH9 465 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 PDLIM7Q9NR12 457 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 LTBP2Q14767 1821 aa20.94■□□□□ 0.94
SHKBP1-203ENST00000594298 DNAH12Q6ZR08 3092 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 F5H6K3 240 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 ATP2A1O14983 1001 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 RAD21O60216 631 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 ZFYP08048 801 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 ZNF865P0CJ78 1059 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 KLRC3Q07444 240 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 RNF180Q86T96 592 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 FERMT2Q96AC1 680 aa20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 PRDM5Q9NQX1 630 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 GREB1LQ9C091 1923 aaPredicted RBP20.93■□□□□ 0.94
SHKBP1-203ENST00000594298 MYH7P12883 1935 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 IGKV6D-41A0A0C4DH26 115 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 RNF113AO15541 343 aaKnown RBP20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 NDUFB10O96000 172 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 AKR1A1P14550 325 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 TAL1P17542 331 aaPredicted RBP20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 GNAT2P19087 354 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 MX1P20591 662 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 SHHQ15465 462 aa20.92■□□□□ 0.94
SHKBP1-203ENST00000594298 LRRFIP1Q32MZ4 808 aaKnown RBP20.92■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms