RNA–Protein interactions for RNA: ENST00000592911.5

SMAD4-215, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 475 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-215ENST00000592911 TRIM43BA6NCK2 446 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 GNAI2P04899 355 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 RAG1P15918 1043 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 DNAJB2P25686 324 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 PLA2G5P39877 138 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 TLE2Q04725 743 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 TTC39AQ5SRH9 613 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 PI16Q6UXB8 463 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 PDCD7Q8N8D1 485 aaKnown RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 NUP133Q8WUM0 1156 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 TRIM43Q96BQ3 446 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 GAS2L1Q99501 681 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 MOV10L1Q9BXT6 1211 aaKnown RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 SEZ6LQ9BYH1 1024 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 ZNF576Q9H609 170 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 RPAP3Q9H6T3 665 aaPredicted RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 THEGQ9P2T0 379 aa10.6□□□□□ -0.71
SMAD4-215ENST00000592911 NOB1Q9ULX3 412 aaKnown RBP10.6□□□□□ -0.71
SMAD4-215ENST00000592911 DCDC2CA8MYV0 355 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 IPO8O15397 1037 aaKnown RBP10.59□□□□□ -0.71
SMAD4-215ENST00000592911 PEX10O60683 326 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 CYP2E1P05181 493 aaPredicted RBP10.59□□□□□ -0.71
SMAD4-215ENST00000592911 FCER1AP12319 257 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 ERCC3P19447 782 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 ADCYAP1R1P41586 468 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 RAB3GAP1Q15042 981 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 TIFAQ96CG3 184 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 MAML3Q96JK9 1138 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 OCEL1Q9H607 264 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 XPNPEP3Q9NQH7 507 aa10.59□□□□□ -0.71
SMAD4-215ENST00000592911 ELP1O95163 1332 aa10.58□□□□□ -0.71
SMAD4-215ENST00000592911 COL11A1P12107 1806 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 AKR1A1P14550 325 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 CST5P28325 142 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 USP5P45974 858 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 MRPS5P82675 430 aaKnown RBP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 PLCB2Q00722 1185 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 GABPAQ06546 454 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 PPIGQ13427 754 aaKnown RBP eCLIP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 TNNI3KQ59H18 835 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 RASIP1Q5U651 963 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 PSRC1Q6PGN9 363 aaPredicted RBP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 TMEM179Q6ZVK1 233 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 ADGRA1Q86SQ6 560 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 FAM9BQ8IZU0 186 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 ASB2Q96Q27 587 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 C1QTNF1Q9BXJ1 281 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 MTIF3Q9H2K0 278 aaKnown RBP10.58□□□□□ -0.72
SMAD4-215ENST00000592911 SWAP70Q9UH65 585 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 FPGT-TNNI3KV9GXZ4 949 aa10.58□□□□□ -0.72
SMAD4-215ENST00000592911 A0A1W2PQ45 241 aaPredicted RBP10.57□□□□□ -0.72
SMAD4-215ENST00000592911 A0A1W2PQY0 241 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 COBLO75128 1261 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 TIMP1P01033 207 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 SHMT1P34896 483 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 MAP3K12Q12852 859 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 GRIN2CQ14957 1233 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 RAB30Q15771 203 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 AAK1Q2M2I8 961 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 FAM47AQ5JRC9 791 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 MFSD5Q6N075 450 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 SH3RF1Q7Z6J0 888 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 SLC44A5Q8NCS7 719 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 FAM122AQ96E09 287 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 TANGO6Q9C0B7 1094 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 TMEM39AQ9NV64 488 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 ADAMTS5Q9UNA0 930 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 SYNGAP1Q96PV0 1343 aa10.57□□□□□ -0.72
SMAD4-215ENST00000592911 WDR46O15213 610 aaKnown RBP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 ADAMTS4O75173 837 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 PPP1R37O75864 691 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 SEC24BO95487 1268 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 CYP7A1P22680 504 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 ZYXQ15942 572 aaKnown RBP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 SHROOM1Q2M3G4 852 aaPredicted RBP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 RIOX2Q8IUF8 465 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 PCSK9Q8NBP7 692 aaKnown RBP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 IL27Q8NEV9 243 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 ACER1Q8TDN7 264 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 CCDC17Q96LX7 622 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 TINF2Q9BSI4 451 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 ARHGEF10LQ9HCE6 1279 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 SAP30BPQ9UHR5 308 aaKnown RBP10.56□□□□□ -0.72
SMAD4-215ENST00000592911 TBX21Q9UL17 535 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 CNPY2Q9Y2B0 182 aa10.56□□□□□ -0.72
SMAD4-215ENST00000592911 ITGB8P26012 769 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 GUCY1A2P33402 732 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 NKX3-2P78367 333 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 FAAP100Q0VG06 881 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 KCTD2Q14681 263 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 TTF1Q15361 905 aaPredicted RBP10.55□□□□□ -0.72
SMAD4-215ENST00000592911 MAMDC4Q6UXC1 1216 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 TMEM199Q8N511 208 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 MAGEB6Q8N7X4 407 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 USP38Q8NB14 1042 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 KLHDC9Q8NEP7 349 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 SSH3Q8TE77 659 aa10.55□□□□□ -0.72
SMAD4-215ENST00000592911 VCPKMTQ9H867 229 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms