RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 GOPCQ9HD26 462 aa16.16■□□□□ 0.18
CAPNS1-213ENST00000592354 DDX20Q9UHI6 824 aaKnown RBP16.16■□□□□ 0.18
CAPNS1-213ENST00000592354 COBLO75128 1261 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 CYBAP13498 195 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 LRRC26Q2I0M4 334 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 SBK1Q52WX2 424 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 PI4K2BQ8TCG2 481 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 SEC62Q99442 399 aaKnown RBP16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 MKNK2Q9HBH9 465 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 TTC41PQ6P2S7 1318 aa16.15■□□□□ 0.18
CAPNS1-213ENST00000592354 STRNO43815 780 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 PRDM1O75626 825 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 APPP05067 770 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 ZFYP08048 801 aaPredicted RBP16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 ANO1Q5XXA6 986 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 FSD1Q9BTV5 496 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 MROH8Q9H579 483 aa16.14■□□□□ 0.17
CAPNS1-213ENST00000592354 LTBP2Q14767 1821 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 SOX1O00570 391 aaPredicted RBP16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 ERC2O15083 957 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 MX1P20591 662 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 OLFML2BQ68BL8 750 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 GIMAP6Q6P9H5 292 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 CRBNQ96SW2 442 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 GDF15Q99988 308 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 PPP1R9AQ9ULJ8 1098 aa16.13■□□□□ 0.17
CAPNS1-213ENST00000592354 LAMA3Q16787 3333 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 VWA5AO00534 786 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 MSCO60682 206 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 IGHA2P01877 340 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 MYCNP04198 464 aaPredicted RBP16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 FCER1AP12319 257 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 GNAT2P19087 354 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 MAGEA10P43363 369 aaPredicted RBP16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 LRCH3Q96II8 777 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 MMP19Q99542 508 aa16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 SENP6Q9GZR1 1112 aaPredicted RBP16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 ZNF214Q9UL59 606 aaPredicted RBP16.12■□□□□ 0.17
CAPNS1-213ENST00000592354 A0A1W2PPC1 479 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 SLC25A27O95847 323 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 NDUFB10O96000 172 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 PGK2P07205 417 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 ATN1P54259 1190 aaPredicted RBP16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 LRRFIP1Q32MZ4 808 aaKnown RBP16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 PRAMEF19Q5SWL8 479 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 GJC2Q5T442 439 aaPredicted RBP16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 IFNL3Q8IZI9 196 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 ABRAQ8N0Z2 381 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 LRRC47Q8N1G4 583 aaKnown RBP16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 MAML3Q96JK9 1138 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 SLF1Q9BQI6 1058 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 ADAMTS5Q9UNA0 930 aa16.11■□□□□ 0.17
CAPNS1-213ENST00000592354 DNM1LO00429 736 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 CCDC129Q6ZRS4 1044 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 RIOX2Q8IUF8 465 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 REPS2Q8NFH8 660 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 CEP95Q96GE4 821 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 SLC5A4Q9NY91 659 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 NYAP2Q9P242 653 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 CLIP2Q9UDT6 1046 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 SALL3Q9BXA9 1300 aa16.1■□□□□ 0.17
CAPNS1-213ENST00000592354 IGKV6D-41A0A0C4DH26 115 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 F5H6K3 240 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 STAT3P40763 770 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 SLC4A3P48751 1232 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 KLRC3Q07444 240 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 KCTD2Q14681 263 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 ZMYM1Q5SVZ6 1142 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 ANKRD45Q5TZF3 282 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 ZNF444Q8N0Y2 327 aaPredicted RBP16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 NACAP1Q9BZK3 213 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 NAPBQ9H115 298 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 PLIN4Q96Q06 1357 aa16.09■□□□□ 0.17
CAPNS1-213ENST00000592354 PATL2C9JE40 543 aaKnown RBP16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 SEPT4O43236 478 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 BMP8BP34820 402 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 MDM2Q00987 491 aaPredicted RBP16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 PPARAQ07869 468 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 FAM47AQ5JRC9 791 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 SNRNP48Q6IEG0 339 aaKnown RBP16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 KIFC2Q96AC6 838 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 CHMP4CQ96CF2 233 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 UBE2OQ9C0C9 1292 aaKnown RBP16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 ZNF287Q9HBT7 754 aa16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 ZBTB47Q9UFB7 747 aaPredicted RBP16.08■□□□□ 0.16
CAPNS1-213ENST00000592354 KBTBD13C9JR72 458 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 FOXP2O15409 715 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 TSPY3P0CV98 308 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 TSPY8P0CW00 308 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 CPXCR1Q8N123 301 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 TEX13BQ9BXU2 312 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 MTMR4Q9NYA4 1195 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 ISY1Q9ULR0 285 aaKnown RBP16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 RIPK3Q9Y572 518 aa16.07■□□□□ 0.16
CAPNS1-213ENST00000592354 TTLL1O95922 423 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 COPB2P35606 906 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 RTP1P59025 263 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 PDE4BQ07343 736 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 ZNF792Q3KQV3 632 aa16.06■□□□□ 0.16
CAPNS1-213ENST00000592354 TDHQ8IZJ6 230 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms