RNA–Protein interactions for RNA: ENST00000592186.5

SMAD4-214, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 1,306 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-214ENST00000592186 CHURC1Q8WUH1 139 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 NUP133Q8WUM0 1156 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SLKQ9H2G2 1235 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-214ENST00000592186 SENP2Q9HC62 589 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 RBM28Q9NW13 759 aaKnown RBP12.44□□□□□ -0.42
SMAD4-214ENST00000592186 TPCN1Q9ULQ1 816 aa12.44□□□□□ -0.42
SMAD4-214ENST00000592186 NAP1L2Q9ULW6 460 aaPredicted RBP12.44□□□□□ -0.42
SMAD4-214ENST00000592186 MYH8P13535 1937 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 TESPA1A2RU30 521 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 PALM3A6NDB9 673 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 GOLGA8BA8MQT2 603 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L15C9J2P7 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L13C9JLJ4 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L11C9JVI0 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L18D6R9N7 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L22D6RA61 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L17D6RBQ6 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L19D6RCP7 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L20D6RJB6 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 PFKFB2O60825 505 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 PDHBP11177 359 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 GJA5P36382 358 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 METAP2P50579 478 aaKnown RBP eCLIP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 USP17L24Q0WX57 530 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 SREBF2Q12772 1141 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 NOGQ13253 232 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 DOCK1Q14185 1865 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 GRM4Q14833 912 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 ZYXQ15942 572 aaKnown RBP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 OTUD7BQ6GQQ9 843 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 CPLX2Q6PUV4 134 aaKnown RBP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 MS4A4AQ96JQ5 239 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 HOXC10Q9NYD6 342 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 FEM1BQ9UK73 627 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 SLC45A1Q9Y2W3 748 aa12.43□□□□□ -0.42
SMAD4-214ENST00000592186 GREB1LQ9C091 1923 aaPredicted RBP12.43□□□□□ -0.42
SMAD4-214ENST00000592186 FAM155AB1AL88 458 aaPredicted RBP12.42□□□□□ -0.42
SMAD4-214ENST00000592186 FDX1P10109 184 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 HSPA6P17066 643 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 HOXA7P31268 230 aaPredicted RBP12.42□□□□□ -0.42
SMAD4-214ENST00000592186 ZNF543Q08ER8 600 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 BECN1Q14457 450 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 RTN1Q16799 776 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 PAXIP1Q6ZW49 1069 aaPredicted RBP12.42□□□□□ -0.42
SMAD4-214ENST00000592186 FAM160B2Q86V87 743 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 MICU3Q86XE3 530 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 HSCBQ8IWL3 235 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 SPICE1Q8N0Z3 855 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 ZCCHC17Q9NP64 241 aaKnown RBP12.42□□□□□ -0.42
SMAD4-214ENST00000592186 AGTPBP1Q9UPW5 1226 aa12.42□□□□□ -0.42
SMAD4-214ENST00000592186 CCL15-CCL14A0A0B4J2E2 113 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 GOLGA8AA7E2F4 631 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 KLRF2D3W0D1 207 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CPLX1O14810 134 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CDKL5O76039 1030 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 VCAM1P19320 739 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 OSBPP22059 807 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 MAP2K2P36507 400 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 TM4SF4P48230 202 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 STAT2P52630 851 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 COG2Q14746 738 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CCL15Q16663 113 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CCDC96Q2M329 555 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 BTNL9Q6UXG8 535 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 GADL1Q6ZQY3 521 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CATSPERGQ6ZRH7 1159 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 ANKRD23Q86SG2 305 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 PRPF38AQ8NAV1 312 aaKnown RBP12.41□□□□□ -0.42
SMAD4-214ENST00000592186 CAPNS2Q96L46 248 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 LARP6Q9BRS8 491 aaKnown RBP12.41□□□□□ -0.42
SMAD4-214ENST00000592186 MAD2L2Q9UI95 211 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 PNMA3Q9UL41 463 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 ISY1Q9ULR0 285 aaKnown RBP12.41□□□□□ -0.42
SMAD4-214ENST00000592186 HPS5Q9UPZ3 1129 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 MTMR7Q9Y216 660 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 NID2Q14112 1375 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 MYPNQ86TC9 1320 aa12.41□□□□□ -0.42
SMAD4-214ENST00000592186 TMEM232C9JQI7 657 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 ANP32AP39687 249 aaKnown RBP12.4□□□□□ -0.42
SMAD4-214ENST00000592186 MKRN3Q13064 507 aaKnown RBP12.4□□□□□ -0.42
SMAD4-214ENST00000592186 TRAF1Q13077 416 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 MOGSQ13724 837 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 ME3Q16798 604 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 KIAA1755Q5JYT7 1200 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 FAM83BQ5T0W9 1011 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 CYP4F22Q6NT55 531 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 TMX3Q96JJ7 454 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 LLPHQ9BRT6 129 aaKnown RBP12.4□□□□□ -0.42
SMAD4-214ENST00000592186 MYL10Q9BUA6 226 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 TANGO6Q9C0B7 1094 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 RPAP3Q9H6T3 665 aaPredicted RBP12.4□□□□□ -0.42
SMAD4-214ENST00000592186 RBM27Q9P2N5 1060 aaKnown RBP12.4□□□□□ -0.42
SMAD4-214ENST00000592186 PNMA2Q9UL42 364 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 ATAD5Q96QE3 1844 aa12.4□□□□□ -0.42
SMAD4-214ENST00000592186 K7ELQ4 463 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 ALDH1A1P00352 501 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 KIF23Q02241 960 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 IKQ13123 557 aaPredicted RBP12.39□□□□□ -0.43
SMAD4-214ENST00000592186 STK3Q13188 491 aa12.39□□□□□ -0.43
SMAD4-214ENST00000592186 GPAT2Q6NUI2 795 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 441.6 ms