RNA–Protein interactions for RNA: ENST00000591650.1

AP3D1-211, Transcript of adaptor related protein complex 3 subunit delta 1, humanhuman

TSL 1 (best)

Gene AP3D1, Length 1,437 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP3D1-211ENST00000591650 FASTKD5Q7L8L6 764 aaKnown RBP20.22■□□□□ 0.83
AP3D1-211ENST00000591650 CATIPQ7Z7H3 387 aa20.22■□□□□ 0.83
AP3D1-211ENST00000591650 MICU3Q86XE3 530 aa20.22■□□□□ 0.83
AP3D1-211ENST00000591650 FAM43AQ8N2R8 423 aa20.22■□□□□ 0.83
AP3D1-211ENST00000591650 DCAF4Q8WV16 495 aa20.22■□□□□ 0.83
AP3D1-211ENST00000591650 GMCL1Q96IK5 515 aa20.22■□□□□ 0.83
AP3D1-211ENST00000591650 ALDH8A1Q9H2A2 487 aaPredicted RBP20.22■□□□□ 0.83
AP3D1-211ENST00000591650 FRMPD2Q68DX3 1309 aaPredicted RBP20.22■□□□□ 0.83
AP3D1-211ENST00000591650 GOLGA8BA8MQT2 603 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 DDAH1O94760 285 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 SLC1A4P43007 532 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 SREBF2Q12772 1141 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 KCTD1Q719H9 257 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 TMTC2Q8N394 836 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 JMYQ8N9B5 988 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 TANGO6Q9C0B7 1094 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 ISY1Q9ULR0 285 aaKnown RBP20.21■□□□□ 0.83
AP3D1-211ENST00000591650 SLC12A7Q9Y666 1083 aa20.21■□□□□ 0.83
AP3D1-211ENST00000591650 CD2BP2O95400 341 aaKnown RBP20.2■□□□□ 0.82
AP3D1-211ENST00000591650 BMP3P12645 472 aa20.2■□□□□ 0.82
AP3D1-211ENST00000591650 ZNF543Q08ER8 600 aa20.2■□□□□ 0.82
AP3D1-211ENST00000591650 GRM4Q14833 912 aa20.2■□□□□ 0.82
AP3D1-211ENST00000591650 CCDC144CPQ8IYA2 1237 aa20.2■□□□□ 0.82
AP3D1-211ENST00000591650 NUP133Q8WUM0 1156 aa20.2■□□□□ 0.82
AP3D1-211ENST00000591650 NAP1L2Q9ULW6 460 aaPredicted RBP20.2■□□□□ 0.82
AP3D1-211ENST00000591650 GOLGA8HP0CJ92 632 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 EVCP57679 992 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 INHBEP58166 350 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 ANKRD23Q86SG2 305 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 IFNL1Q8IU54 200 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 FBXO28Q9NVF7 368 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 TPCN1Q9ULQ1 816 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 HPS5Q9UPZ3 1129 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 NID2Q14112 1375 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 MYH6P13533 1939 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 PDHXO00330 501 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 ZBTB43O43298 467 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 LARGE1O95461 756 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 STAG2Q8N3U4 1231 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 GPCPD1Q9NPB8 672 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 MAD2L2Q9UI95 211 aa20.19■□□□□ 0.82
AP3D1-211ENST00000591650 BAZ2BQ9UIF8 2168 aaKnown RBP20.18■□□□□ 0.82
AP3D1-211ENST00000591650 GOLGA8AA7E2F4 631 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L15C9J2P7 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L13C9JLJ4 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L11C9JVI0 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L18D6R9N7 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L22D6RA61 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L17D6RBQ6 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L19D6RCP7 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L20D6RJB6 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 PARP1P09874 1014 aaKnown RBP20.18■□□□□ 0.82
AP3D1-211ENST00000591650 USP17L24Q0WX57 530 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 ANKRD1Q15327 319 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 ASPRV1Q53RT3 343 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 TTBK2Q6IQ55 1244 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 CATSPERGQ6ZRH7 1159 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 REM2Q8IYK8 340 aaPredicted RBP20.18■□□□□ 0.82
AP3D1-211ENST00000591650 CPVLQ9H3G5 476 aa20.18■□□□□ 0.82
AP3D1-211ENST00000591650 TMEM232C9JQI7 657 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 ST18O60284 1047 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 FLOT1O75955 427 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 CALM1P0DP23 149 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 CALM2P0DP24 149 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 CALM3P0DP25 149 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 HOXA7P31268 230 aaPredicted RBP20.17■□□□□ 0.82
AP3D1-211ENST00000591650 SYNE3Q6ZMZ3 975 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 ASCC2Q9H1I8 757 aaPredicted RBP20.17■□□□□ 0.82
AP3D1-211ENST00000591650 WBP1LQ9NX94 342 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 SLC45A1Q9Y2W3 748 aa20.17■□□□□ 0.82
AP3D1-211ENST00000591650 PALM3A6NDB9 673 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 CYP2C8P10632 490 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 PDIA3P30101 505 aaKnown RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 METAP2P50579 478 aaKnown RBP eCLIP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 RCAN1P53805 252 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 IRX3P78415 501 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 MAP2K1Q02750 393 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 STK3Q13188 491 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 PABPC4Q13310 644 aaKnown RBP eCLIP20.16■□□□□ 0.827e-6■■□□□ 14.2
AP3D1-211ENST00000591650 SLC35G1Q2M3R5 365 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 GPATCH4Q5T3I0 446 aaKnown RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 SAMD1Q6SPF0 538 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 CTCFLQ8NI51 663 aaPredicted RBP20.16■□□□□ 0.82
AP3D1-211ENST00000591650 MAP3K14Q99558 947 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 RNF186Q9NXI6 227 aa20.16■□□□□ 0.82
AP3D1-211ENST00000591650 SPDYE16A6NNV3 312 aaPredicted RBP20.15■□□□□ 0.82
AP3D1-211ENST00000591650 PLEKHA8P1O95397 391 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 SLC16A2P36021 539 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 STAT2P52630 851 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 IKQ13123 557 aaPredicted RBP20.15■□□□□ 0.82
AP3D1-211ENST00000591650 RTN1Q16799 776 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 FANCBQ8NB91 859 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 ZNF274Q96GC6 653 aaPredicted RBP20.15■□□□□ 0.82
AP3D1-211ENST00000591650 SLF1Q9BQI6 1058 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 NCOA5Q9HCD5 579 aaKnown RBP20.15■□□□□ 0.82
AP3D1-211ENST00000591650 FAM217BQ9NTX9 383 aaPredicted RBP20.15■□□□□ 0.82
AP3D1-211ENST00000591650 FEM1BQ9UK73 627 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 ADGRA2Q96PE1 1338 aa20.15■□□□□ 0.82
AP3D1-211ENST00000591650 CDC27P30260 824 aa20.14■□□□□ 0.81
AP3D1-211ENST00000591650 CCT2P78371 535 aaKnown RBP20.14■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms