RNA–Protein interactions for RNA: ENST00000589709.1

VAT1-206, Transcript of vesicle amine transport 1, humanhuman

TSL 4

Gene VAT1, Length 570 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-206ENST00000589709 TMEM132BQ14DG7 1078 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 NCAPG2Q86XI2 1143 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 RIOX2Q8IUF8 465 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 C7orf61Q8IZ16 206 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 IFNL3Q8IZI9 196 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 OTUD7AQ8TE49 926 aaPredicted RBP14.6□□□□□ -0.07
VAT1-206ENST00000589709 GDF15Q99988 308 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 NACAP1Q9BZK3 213 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 FBXO28Q9NVF7 368 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 STAP2Q9UGK3 403 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 PPP1R9AQ9ULJ8 1098 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 SYNPO2Q9UMS6 1093 aa14.6□□□□□ -0.07
VAT1-206ENST00000589709 RANBP2P49792 3224 aaKnown RBP14.6□□□□□ -0.07
VAT1-206ENST00000589709 ZNF236Q9UL36 1845 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 F5H6K3 240 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 VWA5AO00534 786 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 APPP05067 770 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 FCER1AP12319 257 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 MX1P20591 662 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 COPB2P35606 906 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 TDO2P48775 406 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 KLRC3Q07444 240 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 ZMYM1Q5SVZ6 1142 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 ZNF444Q8N0Y2 327 aaPredicted RBP14.59□□□□□ -0.07
VAT1-206ENST00000589709 TRPV1Q8NER1 839 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 MKL1Q969V6 931 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 SALL3Q9BXA9 1300 aa14.59□□□□□ -0.07
VAT1-206ENST00000589709 CNGA1P29973 690 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 STAT3P40763 770 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 FAM83BQ5T0W9 1011 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 REPS2Q8NFH8 660 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 FSD1Q9BTV5 496 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 ZNF214Q9UL59 606 aaPredicted RBP14.58□□□□□ -0.08
VAT1-206ENST00000589709 DIS3Q9Y2L1 958 aaKnown RBP14.58□□□□□ -0.08
VAT1-206ENST00000589709 ALPK3Q96L96 1907 aa14.58□□□□□ -0.08
VAT1-206ENST00000589709 GREB1LQ9C091 1923 aaPredicted RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 DNM1LO00429 736 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 SEPT4O43236 478 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 NDUFB10O96000 172 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 HDAC1Q13547 482 aaPredicted RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 PRPF38AQ8NAV1 312 aaKnown RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 ARRDC4Q8NCT1 418 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 MAML3Q96JK9 1138 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 SEC62Q99442 399 aaKnown RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 SLF1Q9BQI6 1058 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 MTMR4Q9NYA4 1195 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 CLIP2Q9UDT6 1046 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 ZBTB47Q9UFB7 747 aaPredicted RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 NRBP1Q9UHY1 535 aa14.57□□□□□ -0.08
VAT1-206ENST00000589709 ZMYND8Q9ULU4 1186 aaPredicted RBP14.57□□□□□ -0.08
VAT1-206ENST00000589709 ATP2A1O14983 1001 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 RAD21O60216 631 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 SLC3A2P08195 630 aaKnown RBP14.56□□□□□ -0.08
VAT1-206ENST00000589709 PDE4BQ07343 736 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 AAMPQ13685 434 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 KCTD2Q14681 263 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 LRRC26Q2I0M4 334 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 ANKRD45Q5TZF3 282 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 SAMD1Q6SPF0 538 aaPredicted RBP14.56□□□□□ -0.08
VAT1-206ENST00000589709 TICAM2Q86XR7 235 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 STK11IPQ8N1F8 1099 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 NEDD1Q8NHV4 660 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 CRBNQ96SW2 442 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 MMP19Q99542 508 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 TEX13BQ9BXU2 312 aa14.56□□□□□ -0.08
VAT1-206ENST00000589709 PARP14Q460N5 1801 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 PRDM1O75626 825 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 TTLL1O95922 423 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 ZNF792Q3KQV3 632 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 GMCL1P1Q8NEA9 526 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 CEP95Q96GE4 821 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 NUP88Q99567 741 aaPredicted RBP14.55□□□□□ -0.08
VAT1-206ENST00000589709 SENP6Q9GZR1 1112 aaPredicted RBP14.55□□□□□ -0.08
VAT1-206ENST00000589709 NAPBQ9H115 298 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 PLIN4Q96Q06 1357 aa14.55□□□□□ -0.08
VAT1-206ENST00000589709 SYN1P17600 705 aa14.54□□□□□ -0.08
VAT1-206ENST00000589709 MAGEA10P43363 369 aaPredicted RBP14.54□□□□□ -0.08
VAT1-206ENST00000589709 PPARAQ07869 468 aa14.54□□□□□ -0.08
VAT1-206ENST00000589709 EVI5LQ96CN4 794 aa14.54□□□□□ -0.08
VAT1-206ENST00000589709 TINF2Q9BSI4 451 aa14.54□□□□□ -0.08
VAT1-206ENST00000589709 FEM1BQ9UK73 627 aa14.54□□□□□ -0.08
VAT1-206ENST00000589709 FOXP2O15409 715 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 ZBED4O75132 1171 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 PGK2P07205 417 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 TSPY3P0CV98 308 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 TSPY8P0CW00 308 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 FDX1P10109 184 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 PDE1AP54750 535 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 TFAP4Q01664 338 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 PPP4R3BQ5MIZ7 849 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 PRAMEF19Q5SWL8 479 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.53□□□□□ -0.08
VAT1-206ENST00000589709 MSL3Q8N5Y2 521 aaKnown RBP14.53□□□□□ -0.08
VAT1-206ENST00000589709 SLC38A10Q9HBR0 1119 aa14.53□□□□□ -0.08
VAT1-206ENST00000589709 OAZ1P54368 228 aa14.52□□□□□ -0.09
VAT1-206ENST00000589709 ALX1Q15699 326 aa14.52□□□□□ -0.09
VAT1-206ENST00000589709 GJC2Q5T442 439 aaPredicted RBP14.52□□□□□ -0.09
VAT1-206ENST00000589709 SLFN13Q68D06 897 aa14.52□□□□□ -0.09
VAT1-206ENST00000589709 SNRNP48Q6IEG0 339 aaKnown RBP14.52□□□□□ -0.09
VAT1-206ENST00000589709 HELLSQ9NRZ9 838 aa14.52□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms