RNA–Protein interactions for RNA: ENST00000585956.5

PTBP1-208, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 3

Gene PTBP1, Length 767 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-208ENST00000585956 SEPT4O43236 478 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 MSCO60682 206 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 PGK2P07205 417 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 ATP5JP18859 108 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 C9orf50Q5SZB4 431 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 C20orf194Q5TEA3 1177 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 SLC39A5Q6ZMH5 540 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 C16orf86Q6ZW13 317 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 FERMT2Q96AC1 680 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 LENG1Q96BZ8 264 aaPredicted RBP23.59■■□□□ 1.37
PTBP1-208ENST00000585956 ADAMTS5Q9UNA0 930 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 PLXNA1Q9UIW2 1896 aa23.59■■□□□ 1.37
PTBP1-208ENST00000585956 STRNO43815 780 aa23.58■■□□□ 1.37
PTBP1-208ENST00000585956 MYCNP04198 464 aaPredicted RBP23.58■■□□□ 1.37
PTBP1-208ENST00000585956 LRRC41Q15345 812 aa23.58■■□□□ 1.37
PTBP1-208ENST00000585956 CTR9Q6PD62 1173 aa23.58■■□□□ 1.37
PTBP1-208ENST00000585956 REPS2Q8NFH8 660 aa23.58■■□□□ 1.37
PTBP1-208ENST00000585956 TRIM43BA6NCK2 446 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 ITGB8P26012 769 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 ADCYAP1R1P41586 468 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 SNX17Q15036 470 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 SHHQ15465 462 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 TRIM43Q96BQ3 446 aaPredicted RBP23.57■■□□□ 1.36
PTBP1-208ENST00000585956 MROH8Q9H579 483 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 ATP8A2Q9NTI2 1148 aa23.57■■□□□ 1.36
PTBP1-208ENST00000585956 MB21D1Q8N884 522 aa23.56■■□□□ 1.36
PTBP1-208ENST00000585956 NUP88Q99567 741 aaPredicted RBP23.56■■□□□ 1.36
PTBP1-208ENST00000585956 ARHGEF10LQ9HCE6 1279 aa23.56■■□□□ 1.36
PTBP1-208ENST00000585956 PDLIM7Q9NR12 457 aa23.56■■□□□ 1.36
PTBP1-208ENST00000585956 SLC4A4Q9Y6R1 1079 aa23.56■■□□□ 1.36
PTBP1-208ENST00000585956 WDR46O15213 610 aaKnown RBP23.55■■□□□ 1.36
PTBP1-208ENST00000585956 RAB11FIP3O75154 756 aa23.55■■□□□ 1.36
PTBP1-208ENST00000585956 FAM83BQ5T0W9 1011 aa23.55■■□□□ 1.36
PTBP1-208ENST00000585956 ABRAQ8N0Z2 381 aa23.55■■□□□ 1.36
PTBP1-208ENST00000585956 STK11IPQ8N1F8 1099 aa23.55■■□□□ 1.36
PTBP1-208ENST00000585956 BADQ92934 168 aa23.55■■□□□ 1.36
PTBP1-208ENST00000585956 PRDM5Q9NQX1 630 aaPredicted RBP23.55■■□□□ 1.36
PTBP1-208ENST00000585956 ZNF214Q9UL59 606 aaPredicted RBP23.55■■□□□ 1.36
PTBP1-208ENST00000585956 UBE3CQ15386 1083 aa23.54■■□□□ 1.36
PTBP1-208ENST00000585956 ZNF792Q3KQV3 632 aa23.54■■□□□ 1.36
PTBP1-208ENST00000585956 TSHZ3Q63HK5 1081 aa23.54■■□□□ 1.36
PTBP1-208ENST00000585956 LBHD1Q9BQE6 289 aaPredicted RBP23.54■■□□□ 1.36
PTBP1-208ENST00000585956 DDX19BQ9UMR2 479 aa23.54■■□□□ 1.36
PTBP1-208ENST00000585956 KBTBD13C9JR72 458 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 VWA5AO00534 786 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 PGK1P00558 417 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 FCER1AP12319 257 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 EPHB4P54760 987 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 ARRDC4Q8NCT1 418 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 MMP19Q99542 508 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 PPP1R9AQ9ULJ8 1098 aa23.53■■□□□ 1.36
PTBP1-208ENST00000585956 HMMRO75330 724 aa23.52■■□□□ 1.36
PTBP1-208ENST00000585956 IRX5P78411 483 aaPredicted RBP23.52■■□□□ 1.36
PTBP1-208ENST00000585956 RIOX2Q8IUF8 465 aa23.52■■□□□ 1.36
PTBP1-208ENST00000585956 CCDC17Q96LX7 622 aa23.52■■□□□ 1.36
PTBP1-208ENST00000585956 RIPK3Q9Y572 518 aa23.52■■□□□ 1.36
PTBP1-208ENST00000585956 ZNF865P0CJ78 1059 aaPredicted RBP23.51■■□□□ 1.35
PTBP1-208ENST00000585956 RASA1P20936 1047 aa23.51■■□□□ 1.35
PTBP1-208ENST00000585956 FAM109BQ6ICB4 259 aaPredicted RBP23.51■■□□□ 1.35
PTBP1-208ENST00000585956 STRBPQ96SI9 672 aaKnown RBP23.51■■□□□ 1.35
PTBP1-208ENST00000585956 GSG1L2A8MUP6 293 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 RAD21O60216 631 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 TLE2Q04725 743 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 DIEXFQ68CQ4 756 aaKnown RBP23.5■■□□□ 1.35
PTBP1-208ENST00000585956 OSBP2Q969R2 916 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 DDX24Q9GZR7 859 aaKnown RBP eCLIP23.5■■□□□ 1.357e-9■□□□□ 10.1
PTBP1-208ENST00000585956 SH2D4AQ9H788 454 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 KANSL2Q9H9L4 492 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 EPB41L4AQ9HCS5 686 aaPredicted RBP23.5■■□□□ 1.35
PTBP1-208ENST00000585956 PHF24Q9UPV7 400 aa23.5■■□□□ 1.35
PTBP1-208ENST00000585956 SLC25A27O95847 323 aa23.49■■□□□ 1.35
PTBP1-208ENST00000585956 STAT3P40763 770 aa23.49■■□□□ 1.35
PTBP1-208ENST00000585956 TINF2Q9BSI4 451 aa23.49■■□□□ 1.35
PTBP1-208ENST00000585956 TTYH1Q9H313 450 aaPredicted RBP23.49■■□□□ 1.35
PTBP1-208ENST00000585956 XPNPEP3Q9NQH7 507 aa23.49■■□□□ 1.35
PTBP1-208ENST00000585956 COL25A1Q9BXS0 654 aaPredicted RBP23.48■■□□□ 1.35
PTBP1-208ENST00000585956 PRKAG2Q9UGJ0 569 aa23.48■■□□□ 1.35
PTBP1-208ENST00000585956 MUC3AQ02505 3323 aa23.48■■□□□ 1.35
PTBP1-208ENST00000585956 MCM3APO60318 1980 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 MYADML2A6NDP7 307 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 ADCY6O43306 1168 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 ADAMTS4O75173 837 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 C1orf53Q5VUE5 145 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 FGD4Q96M96 766 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 LRRCC1Q9C099 1032 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 SLC5A4Q9NY91 659 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 MYH4Q9Y623 1939 aa23.47■■□□□ 1.35
PTBP1-208ENST00000585956 IGKV6D-41A0A0C4DH26 115 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 A0A1W2PQ45 241 aaPredicted RBP23.46■■□□□ 1.35
PTBP1-208ENST00000585956 A0A1W2PQY0 241 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 M0R2C6 588 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 SNAI1O95863 264 aaPredicted RBP23.46■■□□□ 1.35
PTBP1-208ENST00000585956 NDUFB10O96000 172 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 MS4A1P11836 297 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 ROBO3Q96MS0 1386 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 CDX2Q99626 313 aaPredicted RBP23.46■■□□□ 1.35
PTBP1-208ENST00000585956 GOPCQ9HD26 462 aa23.46■■□□□ 1.35
PTBP1-208ENST00000585956 PRDM1O75626 825 aa23.45■■□□□ 1.34
PTBP1-208ENST00000585956 RARBP10826 455 aa23.45■■□□□ 1.34
PTBP1-208ENST00000585956 KCTD2Q14681 263 aa23.45■■□□□ 1.34
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms