RNA–Protein interactions for RNA: ENST00000583732.1

SREBF1-222, Transcript of sterol regulatory element binding transcription factor 1, human

TSL 4

Gene SREBF1, Length 580 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SREBF1-222	ENST00000583732	TSHZ3	Q63HK5	1081 aa		18.19	■□□□□ 0.5
SREBF1-222	ENST00000583732	CTR9	Q6PD62	1173 aa		18.19	■□□□□ 0.5
SREBF1-222	ENST00000583732	IGHA2	P01877	340 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	LRIT3	Q3SXY7	679 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	DEFB123	Q8N688	67 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	SLC17A8	Q8NDX2	589 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	MAML3	Q96JK9	1138 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	SLC5A4	Q9NY91	659 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	ATP11B	Q9Y2G3	1177 aa		18.18	■□□□□ 0.5
SREBF1-222	ENST00000583732	KBTBD13	C9JR72	458 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	FCER1A	P12319	257 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	FAM83B	Q5T0W9	1011 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	MMP19	Q99542	508 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	LBHD1	Q9BQE6	289 aa	Predicted RBP	18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	KANSL2	Q9H9L4	492 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	GOPC	Q9HD26	462 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	ECHDC1	Q9NTX5	307 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	ARPP21	Q9UBL0	812 aa	Predicted RBP	18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	MYH4	Q9Y623	1939 aa		18.17	■□□□□ 0.5
SREBF1-222	ENST00000583732	MINDY4B	A8MYZ0	360 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	SEPT4	O43236	478 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	PGK2	P07205	417 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	ABRA	Q8N0Z2	381 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	ARRDC4	Q8NCT1	418 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	PRDM5	Q9NQX1	630 aa	Predicted RBP	18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	PRKAG2	Q9UGJ0	569 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	DNAH12	Q6ZR08	3092 aa		18.16	■□□□□ 0.5
SREBF1-222	ENST00000583732	SLC25A27	O95847	323 aa		18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	FAM47A	Q5JRC9	791 aa		18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	FERMT2	Q96AC1	680 aa		18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	STRBP	Q96SI9	672 aa	Known RBP	18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	NUP88	Q99567	741 aa	Predicted RBP	18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	GNL3	Q9BVP2	549 aa	Known RBP eCLIP	18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	PPP1R9A	Q9ULJ8	1098 aa		18.15	■□□□□ 0.5
SREBF1-222	ENST00000583732	GPR153	Q6NV75	609 aa		18.14	■□□□□ 0.49
SREBF1-222	ENST00000583732	RIOX2	Q8IUF8	465 aa		18.14	■□□□□ 0.49
SREBF1-222	ENST00000583732	KBTBD3	Q8NAB2	608 aa		18.14	■□□□□ 0.49
SREBF1-222	ENST00000583732	GPATCH3	Q96I76	525 aa		18.14	■□□□□ 0.49
SREBF1-222	ENST00000583732	MKNK2	Q9HBH9	465 aa		18.14	■□□□□ 0.49
SREBF1-222	ENST00000583732	GSG1L2	A8MUP6	293 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	VWA5A	O00534	786 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	RASA1	P20936	1047 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	STAT3	P40763	770 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	ADCYAP1R1	P41586	468 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	SLC4A3	P48751	1232 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	KCTD2	Q14681	263 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	LRRC41	Q15345	812 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	TRIM60	Q495X7	471 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	SLC39A5	Q6ZMH5	540 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	APPBP2	Q92624	585 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	OSBP2	Q969R2	916 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	ADAMTS5	Q9UNA0	930 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732	SMCHD1	A6NHR9	2005 aa		18.13	■□□□□ 0.49
SREBF1-222	ENST00000583732		M0R2C6	588 aa		18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	TDO2	P48775	406 aa		18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	SBK1	Q52WX2	424 aa		18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	REPS2	Q8NFH8	660 aa		18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	EPB41L4A	Q9HCS5	686 aa	Predicted RBP	18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	ZNF214	Q9UL59	606 aa	Predicted RBP	18.12	■□□□□ 0.49
SREBF1-222	ENST00000583732	RNF113A	O15541	343 aa	Known RBP	18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	GPAA1	O43292	621 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	PRDM1	O75626	825 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	APP	P05067	770 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	TAL1	P17542	331 aa	Predicted RBP	18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	LENG1	Q96BZ8	264 aa	Predicted RBP	18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	SLF1	Q9BQI6	1058 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	TINF2	Q9BSI4	451 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	XPNPEP3	Q9NQH7	507 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	MTMR10	Q9NXD2	777 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	ROBO3	Q96MS0	1386 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	COL6A3	P12111	3177 aa		18.11	■□□□□ 0.49
SREBF1-222	ENST00000583732	NDUFB10	O96000	172 aa		18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732	RARB	P10826	455 aa		18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732	ZNF792	Q3KQV3	632 aa		18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732	SNRNP48	Q6IEG0	339 aa	Known RBP	18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732	DCTPP1	Q9H773	170 aa		18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732	CLIP2	Q9UDT6	1046 aa		18.1	■□□□□ 0.49
SREBF1-222	ENST00000583732		F5H6K3	240 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	DLL1	O00548	723 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	PGK1	P00558	417 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	COPB2	P35606	906 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	KLRC3	Q07444	240 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	GIMAP6	Q6P9H5	292 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	SH3RF1	Q7Z6J0	888 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	CPXCR1	Q8N123	301 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	BAD	Q92934	168 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	FAM161B	Q96MY7	647 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	PDLIM7	Q9NR12	457 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	NYAP2	Q9P242	653 aa		18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	CTDP1	Q9Y5B0	961 aa	Predicted RBP	18.09	■□□□□ 0.49
SREBF1-222	ENST00000583732	SNX17	Q15036	470 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	LRRC47	Q8N1G4	583 aa	Known RBP	18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	KIFC2	Q96AC6	838 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	SEC62	Q99442	399 aa	Known RBP	18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	TEX13B	Q9BXU2	312 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	NRBP1	Q9UHY1	535 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	ISY1	Q9ULR0	285 aa	Known RBP	18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	STXBP5L	Q9Y2K9	1186 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	RIPK3	Q9Y572	518 aa		18.08	■□□□□ 0.48
SREBF1-222	ENST00000583732	IGKV6D-41	A0A0C4DH26	115 aa		18.07	■□□□□ 0.48

Retrieved 100 of 20,778 RNA–protein pairs in 78.8 ms