RNA–Protein interactions for RNA: ENST00000582933.5

PPP4R1-223, Transcript of protein phosphatase 4 regulatory subunit 1, humanhuman

TSL 4

Gene PPP4R1, Length 579 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPP4R1-223ENST00000582933 RANBP17Q9H2T7 1088 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 KDM4CQ9H3R0 1056 aa7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 JADE2Q9NQC1 790 aa7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 RYDENQ9NUL5 291 aaKnown RBP7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 KCNH4Q9UQ05 1017 aa7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 DOCK1Q14185 1865 aa7.1□□□□□ -1.27
PPP4R1-223ENST00000582933 ZMYM6O95789 1325 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 CCDC171Q6TFL3 1326 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 HIP1O00291 1037 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 FOXN1O15353 648 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 PPFIA4O75335 1185 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 POLR3DP05423 398 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 ASNSP08243 561 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 CYP2D6P10635 497 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 CETPP11597 493 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 PTPRAP18433 802 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 SDSP20132 328 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 GUCY2CP25092 1073 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 SHMT1P34896 483 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 TM4SF4P48230 202 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 PLCD1P51178 756 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 NMIQ13287 307 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 SNAPC2Q13487 334 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 RRP1BQ14684 758 aaKnown RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 SBK1Q52WX2 424 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 C12orf60Q5U649 245 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 TATDN1Q6P1N9 297 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 ZNF467Q7Z7K2 595 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 ZNF589Q86UQ0 364 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 BRI3BPQ8WY22 251 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 RILPL2Q969X0 211 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 FAM227BQ96M60 508 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 TBC1D2Q9BYX2 928 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 NACAP1Q9BZK3 213 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 HELLSQ9NRZ9 838 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 DIAPH3Q9NSV4 1193 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 GINM1Q9NU53 330 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 FRMD4AQ9P2Q2 1039 aaPredicted RBP7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 SWAP70Q9UH65 585 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 ZBTB21Q9ULJ3 1066 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 STK24Q9Y6E0 443 aa7.09□□□□□ -1.27
PPP4R1-223ENST00000582933 HTTP42858 3142 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CYP2D7A0A087X1C5 515 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CCL15-CCL14A0A0B4J2E2 113 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 A0A0G2JLL6 359 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 USP17L12C9JPN9 530 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 USP17L21D6R901 530 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 IGF2BP3O00425 579 aaKnown RBP eCLIP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 ALDH1A1P00352 501 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 SETSIPP0DME0 302 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 HSPA8P11142 646 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CAPN2P17655 700 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 PAX7P23759 505 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CTCFP49711 727 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 INHBEP58166 350 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CCL15Q16663 113 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 SHROOM1Q2M3G4 852 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 MCMDC2Q4G0Z9 681 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 BMP2KLQ5H9B9 411 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 ICE2Q659A1 982 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CCDC129Q6ZRS4 1044 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 C16orf86Q6ZW13 317 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 PRRT2Q7Z6L0 340 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 IFNL1Q8IU54 200 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 SLC44A5Q8NCS7 719 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CFHR5Q9BXR6 569 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 TSPYL2Q9H2G4 693 aaPredicted RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 ZCCHC17Q9NP64 241 aaKnown RBP7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 ZHX2Q9Y6X8 837 aa7.08□□□□□ -1.28
PPP4R1-223ENST00000582933 CCDC196A0A1B0GTZ2 297 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 CCDC189A1A4V9 331 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 TRIM75PA6NK02 468 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 USP17L5A8MUK1 530 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 CXCL11O14625 94 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 GDF11O95390 407 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 GH2P01242 217 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 FAM200BP0CF97 657 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 NOP2P46087 812 aaKnown RBP7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 JAG1P78504 1218 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 MOGSQ13724 837 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 ABCB5Q2M3G0 1257 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 NOM1Q5C9Z4 860 aaKnown RBP7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 ZFYVE27Q5T4F4 411 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 VPS53Q5VIR6 699 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 ZNF771Q7L3S4 317 aaPredicted RBP7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 CCDC84Q86UT8 332 aaPredicted RBP7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 IFNL3Q8IZI9 196 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 ZNF280CQ8ND82 737 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 DYNLL2Q96FJ2 89 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 PTPN18Q99952 460 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 WDR18Q9BV38 432 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 NAPBQ9H115 298 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 ARHGEF10LQ9HCE6 1279 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 RNF186Q9NXI6 227 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 AFG3L2Q9Y4W6 797 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 PLIN4Q96Q06 1357 aa7.07□□□□□ -1.28
PPP4R1-223ENST00000582933 LOC285556D6RIA3 1793 aa7.06□□□□□ -1.28
PPP4R1-223ENST00000582933 ANKRD33BA6NCL7 494 aa7.06□□□□□ -1.28
PPP4R1-223ENST00000582933 SMIM22K7EJ46 135 aa7.06□□□□□ -1.28
PPP4R1-223ENST00000582933 TRPA1O75762 1119 aa7.06□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms