RNA–Protein interactions for RNA: ENST00000581204.1

SUPT4H1-206, Transcript of SPT4 homolog, DSIF elongation factor subunit, humanhuman

TSL 2

Gene SUPT4H1, Length 539 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUPT4H1-206ENST00000581204 HMG20BQ9P0W2 317 aa10.09□□□□□ -0.79
SUPT4H1-206ENST00000581204 RFX7Q2KHR2 1363 aa10.09□□□□□ -0.79
SUPT4H1-206ENST00000581204 MYH7P12883 1935 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 MYH13Q9UKX3 1938 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 RNF113AO15541 343 aaKnown RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 SGSM2O43147 1006 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZBTB24O43167 697 aaPredicted RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZFYP08048 801 aaPredicted RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 MCCP23508 829 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 RASGRF1Q13972 1273 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 OTUD7BQ6GQQ9 843 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZSCAN25Q6NSZ9 544 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZNF804AQ7Z570 1209 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 TICAM2Q86XR7 235 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 APOBEC3FQ8IUX4 373 aaKnown RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 BRI3BPQ8WY22 251 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM84BQ96KN1 310 aaPredicted RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM227BQ96M60 508 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 USP26Q9BXU7 913 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 DENND2AQ9ULE3 1009 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 IQSEC3Q9UPP2 1182 aaPredicted RBP10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 CDH23Q9H251 3354 aa10.08□□□□□ -0.8
SUPT4H1-206ENST00000581204 RAD50Q92878 1312 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 A0A0D9SFI3 127 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 MAGEB6P1A0A0J9YX57 407 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 UNCXA6NJT0 531 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 PIK3CDO00329 1044 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 IDH1O75874 414 aaKnown RBP10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 BRD1O95696 1058 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 CYP2E1P05181 493 aaPredicted RBP10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 CCL5P13501 91 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 KLRK1P26718 216 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 LACTBP83111 547 aaPredicted RBP10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 MAP3K12Q12852 859 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 ARHGEF6Q15052 776 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 NBPF20Q3BBV1 942 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 DACT2Q5SW24 774 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 FBXO33Q7Z6M2 555 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM43AQ8N2R8 423 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 LRP2BPQ9P2M1 347 aa10.07□□□□□ -0.8
SUPT4H1-206ENST00000581204 RBM25P49756 843 aaKnown RBP10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 PRMT2P55345 433 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 TAF1CQ15572 869 aaPredicted RBP10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 EML3Q32P44 896 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 MCMDC2Q4G0Z9 681 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 TDHQ8IZJ6 230 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 PHTF2Q8N3S3 785 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 PLPP7Q8NBV4 271 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 U2AF1L4Q8WU68 220 aaKnown RBP10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 BAP1Q92560 729 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 PIH1D3Q9NQM4 214 aaKnown RBP10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 HELLSQ9NRZ9 838 aa10.06□□□□□ -0.8
SUPT4H1-206ENST00000581204 ECM29Q5VYK3 1845 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 MYO5AQ9Y4I1 1855 aaKnown RBP10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM196BA6NMK8 535 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 EPB41L2O43491 1005 aaKnown RBP10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 KCNA1Q09470 495 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 CHAF1AQ13111 956 aaPredicted RBP10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZMYM1Q5SVZ6 1142 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 SLC9C2Q5TAH2 1124 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 C15orf52Q6ZUT6 534 aaKnown RBP10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 TXNRD3Q86VQ6 643 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 TRIM50Q86XT4 487 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM174AQ8TBP5 190 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM122AQ96E09 287 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 DEFB129Q9H1M3 183 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 IL25Q9H293 177 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZFYVE28Q9HCC9 887 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 ABCF2Q9UG63 623 aa10.05□□□□□ -0.8
SUPT4H1-206ENST00000581204 MED23Q9ULK4 1368 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 TTC28Q96AY4 2481 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 TLR2O60603 784 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 USP2O75604 605 aaPredicted RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 GNRH1P01148 92 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 MAGEA10P43363 369 aaPredicted RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 FAM109BQ6ICB4 259 aaPredicted RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 CCDC129Q6ZRS4 1044 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 PODNQ7Z5L7 613 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 MAGEB6Q8N7X4 407 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 ANKLE1Q8NAG6 615 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 APPBP2Q92624 585 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 OPTNQ96CV9 577 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 SEC62Q99442 399 aaKnown RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 LSG1Q9H089 658 aaKnown RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 RNF208Q9H0X6 261 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 RAI14Q9P0K7 980 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 SRRDQ9UH36 339 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 ZMYND8Q9ULU4 1186 aaPredicted RBP10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 CCDC171Q6TFL3 1326 aa10.04□□□□□ -0.8
SUPT4H1-206ENST00000581204 DOCK2Q92608 1830 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 SGPL1O95470 568 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 CHGBP05060 677 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 PDE6AP16499 860 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 GRK4P32298 578 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 ADD2P35612 726 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 ATP1A2P50993 1020 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 PTH1RQ03431 593 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 NCOA4Q13772 614 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 BECN1Q14457 450 aa10.03□□□□□ -0.8
SUPT4H1-206ENST00000581204 UBE3CQ15386 1083 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms