RNA–Protein interactions for RNA: ENST00000581003.5

CBX1-206, Transcript of chromobox 1, humanhuman

TSL 3

Gene CBX1, Length 812 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX1-206ENST00000581003 PDE4BQ07343 736 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 PLS1Q14651 629 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 ALX1Q15699 326 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 CCAR1Q8IX12 1150 aaKnown RBP14.95□□□□□ -0.02
CBX1-206ENST00000581003 DEFB118Q96PH6 123 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 NUDT12Q9BQG2 462 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 SPATC1LQ9H0A9 340 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 DIAPH3Q9NSV4 1193 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 ANAPC4Q9UJX5 808 aa14.95□□□□□ -0.02
CBX1-206ENST00000581003 NEDD4P46934 1319 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 MYH4Q9Y623 1939 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 HMGCRP04035 888 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 ERCC3P19447 782 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 RRP12Q5JTH9 1297 aaKnown RBP14.94□□□□□ -0.02
CBX1-206ENST00000581003 REPS2Q8NFH8 660 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 NPLOC4Q8TAT6 608 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 U2AF1L4Q8WU68 220 aaKnown RBP14.94□□□□□ -0.02
CBX1-206ENST00000581003 SOCS4Q8WXH5 440 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 CWC22Q9HCG8 908 aaKnown RBP14.94□□□□□ -0.02
CBX1-206ENST00000581003 PPP1R9AQ9ULJ8 1098 aa14.94□□□□□ -0.02
CBX1-206ENST00000581003 TSPY2A6NKD2 308 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 VWA5AO00534 786 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 RANBP6O60518 1105 aaKnown RBP14.93□□□□□ -0.02
CBX1-206ENST00000581003 TTLL1O95922 423 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 GJB1P08034 283 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 SLC3A2P08195 630 aaKnown RBP14.93□□□□□ -0.02
CBX1-206ENST00000581003 PRKAR2AP13861 404 aaKnown RBP14.93□□□□□ -0.02
CBX1-206ENST00000581003 PTPREP23469 700 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 GJA8P48165 433 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 MAP2K5Q13163 448 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 GRB14Q14449 540 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 APBA2Q99767 749 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.93□□□□□ -0.022e-6■■■■□ 26.6
CBX1-206ENST00000581003 PAK6Q9NQU5 681 aaPredicted RBP14.93□□□□□ -0.02
CBX1-206ENST00000581003 TOMM22Q9NS69 142 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 HOXC10Q9NYD6 342 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 MTMR7Q9Y216 660 aa14.93□□□□□ -0.02
CBX1-206ENST00000581003 LAMA4Q16363 1823 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 FGRP09769 529 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 ZKSCAN1P17029 563 aaPredicted RBP14.92□□□□□ -0.02
CBX1-206ENST00000581003 TAL1P17542 331 aaPredicted RBP14.92□□□□□ -0.02
CBX1-206ENST00000581003 CCND3P30281 292 aaPredicted RBP14.92□□□□□ -0.02
CBX1-206ENST00000581003 RGS2P41220 211 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 CCNA1P78396 465 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 MAP3K21Q5TCX8 1036 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 NCAPG2Q86XI2 1143 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 DIS3LQ8TF46 1054 aaKnown RBP14.92□□□□□ -0.02
CBX1-206ENST00000581003 MKL1Q969V6 931 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 ZNF287Q9HBT7 754 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 ZNF214Q9UL59 606 aaPredicted RBP14.92□□□□□ -0.02
CBX1-206ENST00000581003 ADAMTS5Q9UNA0 930 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 STX8Q9UNK0 236 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 ZNF236Q9UL36 1845 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 ZMYM6O95789 1325 aa14.92□□□□□ -0.02
CBX1-206ENST00000581003 KIAA0100Q14667 2235 aaKnown RBP14.91□□□□□ -0.02
CBX1-206ENST00000581003 SLC15A5A6NIM6 579 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 ORC4O43929 436 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 COBLO75128 1261 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 ADORA2AP29274 412 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 SNAP25P60880 206 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 CACNB2Q08289 660 aaPredicted RBP14.91□□□□□ -0.02
CBX1-206ENST00000581003 SLFN13Q68D06 897 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 UBE2Q1Q7Z7E8 422 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 GMCL1P1Q8NEA9 526 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 KIFC2Q96AC6 838 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 SLF1Q9BQI6 1058 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 PCDH10Q9P2E7 1040 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 ISY1Q9ULR0 285 aaKnown RBP14.91□□□□□ -0.02
CBX1-206ENST00000581003 RIPK3Q9Y572 518 aa14.91□□□□□ -0.02
CBX1-206ENST00000581003 SGPL1O95470 568 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 PGK2P07205 417 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 XRCC5P13010 732 aaKnown RBP14.9□□□□□ -0.02
CBX1-206ENST00000581003 MCCP23508 829 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 CYP2C19P33261 490 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 SLC4A3P48751 1232 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 KCTD1Q719H9 257 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 MB21D1Q8N884 522 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 TRPV1Q8NER1 839 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 ZKSCAN3Q9BRR0 538 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 TAF6LQ9Y6J9 622 aa14.9□□□□□ -0.02
CBX1-206ENST00000581003 BMP3P12645 472 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 CHMLP26374 656 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 TICAM2Q86XR7 235 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 SHCBP1Q8NEM2 672 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 STAG1Q8WVM7 1258 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 CRISPLD2Q9H0B8 497 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 RAVER2Q9HCJ3 691 aaKnown RBP14.89□□□□□ -0.03
CBX1-206ENST00000581003 IVNS1ABPQ9Y6Y0 642 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 RPTORQ8N122 1335 aa14.89□□□□□ -0.03
CBX1-206ENST00000581003 TMEM232C9JQI7 657 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 FARP2O94887 1054 aaPredicted RBP14.88□□□□□ -0.03
CBX1-206ENST00000581003 IGHA2P01877 340 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 TFRCP02786 760 aaKnown RBP14.88□□□□□ -0.03
CBX1-206ENST00000581003 STAT3P40763 770 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 NOVP48745 357 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 MNX1P50219 401 aaPredicted RBP14.88□□□□□ -0.03
CBX1-206ENST00000581003 PTH1RQ03431 593 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 AKNAD1Q5T1N1 836 aa14.88□□□□□ -0.03
CBX1-206ENST00000581003 SNRNP48Q6IEG0 339 aaKnown RBP14.88□□□□□ -0.03
CBX1-206ENST00000581003 RCSD1Q6JBY9 416 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 550.8 ms