RNA–Protein interactions for RNA: ENST00000578845.2

CDKN2A-212, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 2 BASIC

Gene CDKN2A, Length 678 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-212ENST00000578845 COL6A1P12109 1028 aa27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 OLFML2BQ68BL8 750 aa27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 SEC62Q99442 399 aaKnown RBP27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 ZNF287Q9HBT7 754 aa27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 PPP1R9AQ9ULJ8 1098 aa27.26■■□□□ 1.95
CDKN2A-212ENST00000578845 TMEM132BQ14DG7 1078 aa27.25■■□□□ 1.95
CDKN2A-212ENST00000578845 NACAP1Q9BZK3 213 aa27.25■■□□□ 1.95
CDKN2A-212ENST00000578845 FBXO28Q9NVF7 368 aa27.25■■□□□ 1.95
CDKN2A-212ENST00000578845 RBM27Q9P2N5 1060 aaKnown RBP27.25■■□□□ 1.95
CDKN2A-212ENST00000578845 STAP2Q9UGK3 403 aa27.25■■□□□ 1.95
CDKN2A-212ENST00000578845 PFASO15067 1338 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 SLC25A27O95847 323 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 APPP05067 770 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 AAMPQ13685 434 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 DPP9Q86TI2 863 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 SYNPO2Q9UMS6 1093 aa27.24■■□□□ 1.95
CDKN2A-212ENST00000578845 PLIN4Q96Q06 1357 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 MSCO60682 206 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 PLS1Q14651 629 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 FAM83BQ5T0W9 1011 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 ANKRD45Q5TZF3 282 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 NCAPG2Q86XI2 1143 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 REPS2Q8NFH8 660 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 FRMPD3Q5JV73 1810 aa27.23■■□□□ 1.95
CDKN2A-212ENST00000578845 VWA5AO00534 786 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 COBLO75128 1261 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 CYBAP13498 195 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 CYP2C19P33261 490 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 RIOX2Q8IUF8 465 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 STK11IPQ8N1F8 1099 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 MKL1Q969V6 931 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 SLC5A4Q9NY91 659 aa27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 ZBTB47Q9UFB7 747 aaPredicted RBP27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 DDX20Q9UHI6 824 aaKnown RBP27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 ZNF214Q9UL59 606 aaPredicted RBP27.22■■□□□ 1.95
CDKN2A-212ENST00000578845 ZNF444Q8N0Y2 327 aaPredicted RBP27.21■■□□□ 1.95
CDKN2A-212ENST00000578845 TRPV1Q8NER1 839 aa27.21■■□□□ 1.95
CDKN2A-212ENST00000578845 COL11A1P12107 1806 aaPredicted RBP27.2■■□□□ 1.95
CDKN2A-212ENST00000578845 DNAH12Q6ZR08 3092 aa27.2■■□□□ 1.95
CDKN2A-212ENST00000578845 F5H6K3 240 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 PRDM1O75626 825 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 NDUFB10O96000 172 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 KLRC3Q07444 240 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 NAPBQ9H115 298 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 MTMR4Q9NYA4 1195 aa27.2■■□□□ 1.94
CDKN2A-212ENST00000578845 A0A1W2PPC1 479 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 FOXP2O15409 715 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 FCER1AP12319 257 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 COPB2P35606 906 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 PDE1AP54750 535 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 TICAM2Q86XR7 235 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 EVI5LQ96CN4 794 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 CEP95Q96GE4 821 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 SLF1Q9BQI6 1058 aa27.19■■□□□ 1.94
CDKN2A-212ENST00000578845 RAD21O60216 631 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 STAT3P40763 770 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 PDE4BQ07343 736 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 PPARAQ07869 468 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 SAMD1Q6SPF0 538 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 C7orf61Q8IZ16 206 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 NEDD1Q8NHV4 660 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 MAML3Q96JK9 1138 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 NUP88Q99567 741 aaPredicted RBP27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 CLIP2Q9UDT6 1046 aa27.18■■□□□ 1.94
CDKN2A-212ENST00000578845 TTLL1O95922 423 aa27.17■■□□□ 1.94
CDKN2A-212ENST00000578845 SLC3A2P08195 630 aaKnown RBP27.17■■□□□ 1.94
CDKN2A-212ENST00000578845 GMCL1P1Q8NEA9 526 aa27.17■■□□□ 1.94
CDKN2A-212ENST00000578845 CNGA1P29973 690 aa27.16■■□□□ 1.94
CDKN2A-212ENST00000578845 PRPF38AQ8NAV1 312 aaKnown RBP27.16■■□□□ 1.94
CDKN2A-212ENST00000578845 MYH4Q9Y623 1939 aa27.16■■□□□ 1.94
CDKN2A-212ENST00000578845 ATP2A1O14983 1001 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 SMC5Q8IY18 1101 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 YTHDC1Q96MU7 727 aaKnown RBP27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 MMP19Q99542 508 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 GDF15Q99988 308 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 TEX13BQ9BXU2 312 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 NRBP1Q9UHY1 535 aa27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 DIS3Q9Y2L1 958 aaKnown RBP27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 DDX52Q9Y2R4 599 aaKnown RBP eCLIP27.15■■□□□ 1.94
CDKN2A-212ENST00000578845 DNM1LO00429 736 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 SEPT4O43236 478 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 TSPY3P0CV98 308 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 TSPY8P0CW00 308 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 CCDC129Q6ZRS4 1044 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 HELLSQ9NRZ9 838 aa27.14■■□□□ 1.94
CDKN2A-212ENST00000578845 BMP8BP34820 402 aa27.13■■□□□ 1.93
CDKN2A-212ENST00000578845 KCTD2Q14681 263 aa27.13■■□□□ 1.93
CDKN2A-212ENST00000578845 ZNF792Q3KQV3 632 aa27.13■■□□□ 1.93
CDKN2A-212ENST00000578845 ANAPC4Q9UJX5 808 aa27.13■■□□□ 1.93
CDKN2A-212ENST00000578845 TFAP4Q01664 338 aa27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 LRRC26Q2I0M4 334 aa27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 FAM47AQ5JRC9 791 aa27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 DHX30Q7L2E3 1194 aaKnown RBP eCLIP27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 FEM1BQ9UK73 627 aa27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 ZMYND8Q9ULU4 1186 aaPredicted RBP27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 ZNFX1Q9P2E3 1918 aaKnown RBP27.12■■□□□ 1.93
CDKN2A-212ENST00000578845 ALX1Q15699 326 aa27.11■■□□□ 1.93
CDKN2A-212ENST00000578845 PPP4R3BQ5MIZ7 849 aa27.11■■□□□ 1.93
CDKN2A-212ENST00000578845 VPS53Q5VIR6 699 aa27.11■■□□□ 1.93
CDKN2A-212ENST00000578845 SNRNP48Q6IEG0 339 aaKnown RBP27.11■■□□□ 1.93
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms