RNA–Protein interactions for RNA: ENST00000577210.5

COPS3-213, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 752 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-213ENST00000577210 TMPRSS7Q7RTY8 843 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 FAM178BQ8IXR5 827 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 SHISA5Q8N114 240 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 LRRC47Q8N1G4 583 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 GPR62Q9BZJ7 368 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 CWC22Q9HCG8 908 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 FBXL21Q9UKT6 434 aa3.81□□□□□ -1.8
COPS3-213ENST00000577210 DIS3Q9Y2L1 958 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 SF3B6Q9Y3B4 125 aaKnown RBP3.81□□□□□ -1.8
COPS3-213ENST00000577210 COL17A1Q9UMD9 1497 aaPredicted RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 FAM170BA6NMN3 283 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 NOP56O00567 594 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 LEFTY1O75610 366 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 CBX7O95931 251 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 APPP05067 770 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 CANXP27824 592 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 HOXA10P31260 410 aaPredicted RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 RASGRF1Q13972 1273 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 TAF7LQ5H9L4 462 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 KIAA1211LQ6NV74 962 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 RUFY4Q6ZNE9 571 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 UBE3DQ7Z6J8 389 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 DTX1Q86Y01 620 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 ZNF655Q8N720 491 aaPredicted RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 FAM169BQ8N8A8 192 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 DAGLBQ8NCG7 672 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 PMFBP1Q8TBY8 1022 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 HNRNPLLQ8WVV9 542 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 VWCEQ96DN2 955 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 SGSM3Q96HU1 749 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 RCC1LQ96I51 464 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 HRASLS5Q96KN8 279 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 SRPK1Q96SB4 655 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 DNAJC2Q99543 621 aaKnown RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 LRRC4CQ9HCJ2 640 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 BSDC1Q9NW68 430 aaPredicted RBP3.8□□□□□ -1.8
COPS3-213ENST00000577210 VAV3Q9UKW4 847 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 FHOD1Q9Y613 1164 aa3.8□□□□□ -1.8
COPS3-213ENST00000577210 CCDC163A0A0D9SF12 145 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 SSU72P8A0A1W2PR75 194 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 PDPK1O15530 556 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 SIGLEC6O43699 453 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 CLSTN1O94985 981 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 GSNP06396 782 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 POLR2BP30876 1174 aaKnown RBP3.79□□□□□ -1.8
COPS3-213ENST00000577210 TXKP42681 527 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 IRAK1P51617 712 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 OXCT1P55809 520 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 PRKCQQ04759 706 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 NMIQ13287 307 aaPredicted RBP3.79□□□□□ -1.8
COPS3-213ENST00000577210 LONRF2Q1L5Z9 754 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 FAM214BQ7L5A3 538 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 DPH6Q7L8W6 267 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 ADAT2Q7Z6V5 191 aaKnown RBP3.79□□□□□ -1.8
COPS3-213ENST00000577210 TMEM192Q8IY95 271 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 DTWD2Q8NBA8 298 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 RIN3Q8TB24 985 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 SYTL5Q8TDW5 730 aaPredicted RBP3.79□□□□□ -1.8
COPS3-213ENST00000577210 CCDC140Q96MF4 163 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 IPO9Q96P70 1041 aaKnown RBP3.79□□□□□ -1.8
COPS3-213ENST00000577210 HAUS7Q99871 368 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 DSCC1Q9BVC3 393 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 TNKS2Q9H2K2 1166 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 TMX1Q9H3N1 280 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 ZSWIM4Q9H7M6 989 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 LRP2BPQ9P2M1 347 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 SUGT1Q9Y2Z0 365 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 MSRB2Q9Y3D2 182 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 CAPN6Q9Y6Q1 641 aa3.79□□□□□ -1.8
COPS3-213ENST00000577210 LTBP3Q9NS15 1303 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 GJB6O95452 261 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 TAL1P17542 331 aaPredicted RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 CD247P20963 164 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 POU4F1Q01851 419 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 GRB10Q13322 594 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 SERINC3Q13530 473 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 ZYXQ15942 572 aaKnown RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 MTERF2Q49AM1 385 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 C6orf15Q6UXA7 325 aaPredicted RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 VSIG10LQ86VR7 867 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 HEXIM2Q96MH2 286 aaKnown RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 DEPDC7Q96QD5 511 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 LNPKQ9C0E8 428 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 CHST7Q9NS84 486 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 LMCD1Q9NZU5 365 aa3.78□□□□□ -1.8
COPS3-213ENST00000577210 ANGEL1Q9UNK9 670 aaKnown RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 TMA7Q9Y2S6 64 aaKnown RBP3.78□□□□□ -1.8
COPS3-213ENST00000577210 TRBV23OR9-2A0A075B6M9 112 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 FAM86C2PA6NEL3 165 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 SUSD5O60279 629 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 PRNPP04156 253 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 TP53P04637 393 aaPredicted RBP3.77□□□□□ -1.81
COPS3-213ENST00000577210 ITIH2P19823 946 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 PCBP3P57721 371 aaKnown RBP3.77□□□□□ -1.81
COPS3-213ENST00000577210 TNK2Q07912 1038 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 FZD5Q13467 585 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 HSP90AA2PQ14568 343 aaPredicted RBP3.77□□□□□ -1.81
COPS3-213ENST00000577210 MSMPQ1L6U9 139 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 CCDC144BQ3MJ40 725 aa3.77□□□□□ -1.81
COPS3-213ENST00000577210 SV2CQ496J9 727 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms