RNA–Protein interactions for RNA: ENST00000576613.5

CTDNEP1-212, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

TSL 3

Gene CTDNEP1, Length 606 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-212ENST00000576613 CLTBP09497 229 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 CYP2D6P10635 497 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 RLBP1P12271 317 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 KCTD2Q14681 263 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 SH3RF1Q7Z6J0 888 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 RHPN1Q8TCX5 695 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 PPIL4Q8WUA2 492 aaKnown RBP eCLIP14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 TRIM43Q96BQ3 446 aaPredicted RBP14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 DDRGK1Q96HY6 314 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 RNPC3Q96LT9 517 aaKnown RBP14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 ATP8A2Q9NTI2 1148 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 ROBO3Q96MS0 1386 aa14.05□□□□□ -0.16
CTDNEP1-212ENST00000576613 PRUNE2Q8WUY3 3088 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 BAZ2AQ9UIF9 1905 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 IFIT2P09913 472 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 AKR1B1P15121 316 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 FOSL2P15408 326 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 RAG1P15918 1043 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 COPB2P35606 906 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 TMEM132BQ14DG7 1078 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 CLEC10AQ8IUN9 316 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 MYLIPQ8WY64 445 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 KIF1BPQ96EK5 621 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 DYNLL2Q96FJ2 89 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 TINF2Q9BSI4 451 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.04□□□□□ -0.164e-6■□□□□ 11.1
CTDNEP1-212ENST00000576613 ARMT1Q9H993 441 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 GOPCQ9HD26 462 aa14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 DIS3Q9Y2L1 958 aaKnown RBP14.04□□□□□ -0.16
CTDNEP1-212ENST00000576613 SPTBN5Q9NRC6 3674 aaKnown RBP14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 MBD4O95243 580 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 AKR1A1P14550 325 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 RIOX2Q8IUF8 465 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 SIAH1Q8IUQ4 282 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 TTYH1Q9H313 450 aaPredicted RBP14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 KANSL2Q9H9L4 492 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 ADAMTS5Q9UNA0 930 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 CNPY2Q9Y2B0 182 aa14.03□□□□□ -0.16
CTDNEP1-212ENST00000576613 SMCHD1A6NHR9 2005 aa14.02□□□□□ -0.16
CTDNEP1-212ENST00000576613 A0A1W2PQ45 241 aaPredicted RBP14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 A0A1W2PQY0 241 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 KIAA0355O15063 1070 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 PQBP1O60828 265 aaKnown RBP14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 PGK1P00558 417 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 PGK2P07205 417 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 STAT3P40763 770 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 CDK8P49336 464 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 FPGSQ05932 587 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 C12orf60Q5U649 245 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 SYMPKQ92797 1274 aaKnown RBP14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 TMEM39AQ9NV64 488 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 PAG1Q9NWQ8 432 aa14.02□□□□□ -0.17
CTDNEP1-212ENST00000576613 DCDC2CA8MYV0 355 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 APBB1O00213 710 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 VWA5AO00534 786 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 RAD21O60216 631 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 HMMRO75330 724 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 EEF2P13639 858 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 ITGB8P26012 769 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 ADD2P35612 726 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 ZNF792Q3KQV3 632 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 C16orf86Q6ZW13 317 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 MSL3Q8N5Y2 521 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 NUP133Q8WUM0 1156 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 TSEN34Q9BSV6 310 aaKnown RBP14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 FBXO28Q9NVF7 368 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 PPP1R9AQ9ULJ8 1098 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 MYH7P12883 1935 aa14.01□□□□□ -0.17
CTDNEP1-212ENST00000576613 USP17L12C9JPN9 530 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 USP17L21D6R901 530 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 PRKAB2O43741 272 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 ZNF865P0CJ78 1059 aaPredicted RBP14□□□□□ -0.17
CTDNEP1-212ENST00000576613 ACLYP53396 1101 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 ANKRD33Q7Z3H0 272 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 TOX2Q96NM4 488 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 BCL11AQ9H165 835 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 STARD7Q9NQZ5 370 aa14□□□□□ -0.17
CTDNEP1-212ENST00000576613 ZNF214Q9UL59 606 aaPredicted RBP14□□□□□ -0.17
CTDNEP1-212ENST00000576613 MROH7Q68CQ1 1323 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 SYNGAP1Q96PV0 1343 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 SYNRGQ9UMZ2 1314 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 CYP2D7A0A087X1C5 515 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 MOXD2PA6NHM9 499 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 ADAMTS4O75173 837 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 MS4A1P11836 297 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 TAL1P17542 331 aaPredicted RBP13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 EPHB4P54760 987 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 FAM83BQ5T0W9 1011 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 CCDC174Q6PII3 467 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 TEX13BQ9BXU2 312 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 FAM184BQ9ULE4 1060 aa13.99□□□□□ -0.17
CTDNEP1-212ENST00000576613 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 RAB11FIP3O75154 756 aa13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 ATP5JP18859 108 aa13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 DNAJB2P25686 324 aa13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 HNRNPUQ00839 825 aaKnown RBP eCLIP13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 FAAP100Q0VG06 881 aa13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 UBE3CQ15386 1083 aa13.98□□□□□ -0.17
CTDNEP1-212ENST00000576613 ZSCAN25Q6NSZ9 544 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 69.2 ms