RNA–Protein interactions for RNA: ENST00000574322.5

CTDNEP1-210, Transcript of CTD nuclear envelope phosphatase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDNEP1, Length 1,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDNEP1-210ENST00000574322 TCP10Q12799 353 aa32.69■■■□□ 2.82
CTDNEP1-210ENST00000574322 TATDN1Q6P1N9 297 aa32.69■■■□□ 2.82
CTDNEP1-210ENST00000574322 FMR1NBQ8N0W7 255 aaPredicted RBP32.69■■■□□ 2.82
CTDNEP1-210ENST00000574322 MTMR14Q8NCE2 650 aa32.69■■■□□ 2.82
CTDNEP1-210ENST00000574322 BAZ2BQ9UIF8 2168 aaKnown RBP32.69■■■□□ 2.82
CTDNEP1-210ENST00000574322 GLTPD2A6NH11 291 aa32.68■■■□□ 2.82
CTDNEP1-210ENST00000574322 CALML3P27482 149 aa32.68■■■□□ 2.82
CTDNEP1-210ENST00000574322 FAM237AA0A1B0GTK4 181 aa32.67■■■□□ 2.82
CTDNEP1-210ENST00000574322 CCDC192P0DO97 292 aa32.67■■■□□ 2.82
CTDNEP1-210ENST00000574322 GMPSP49915 693 aaPredicted RBP32.67■■■□□ 2.82
CTDNEP1-210ENST00000574322 CAMK4Q16566 473 aa32.67■■■□□ 2.82
CTDNEP1-210ENST00000574322 OGFOD1Q8N543 542 aa32.67■■■□□ 2.82
CTDNEP1-210ENST00000574322 PDHBP11177 359 aa32.66■■■□□ 2.82
CTDNEP1-210ENST00000574322 RPS12P25398 132 aaKnown RBP32.66■■■□□ 2.82
CTDNEP1-210ENST00000574322 VEGFAP15692 232 aaPredicted RBP32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 MMP14P50281 582 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 ASPRV1Q53RT3 343 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 GALNT17Q6IS24 598 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 CABP5Q9NP86 173 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 CEP131Q9UPN4 1083 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 KINO60870 393 aaKnown RBP32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 CUTAO60888 179 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 NLRP5P59047 1200 aa32.65■■■□□ 2.82
CTDNEP1-210ENST00000574322 MARCKSP29966 332 aaPredicted RBP32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 DLGAP5Q15398 846 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 UVSSAQ2YD98 709 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 FKBP1CQ5VVH2 108 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 USP17L2Q6R6M4 530 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 TMOD2Q9NZR1 351 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 CLIP2Q9UDT6 1046 aa32.64■■■□□ 2.82
CTDNEP1-210ENST00000574322 USP17L5A8MUK1 530 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZSCAN29Q8IWY8 852 aaPredicted RBP32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 DAGLBQ8NCG7 672 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 MKL1Q969V6 931 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 RIOX1Q9H6W3 641 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 BARHL2Q9NY43 387 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 GOLGA8HP0CJ92 632 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 NDUFA8P51970 172 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 CERKLQ49MI3 558 aaPredicted RBP32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 CCDC148Q8NFR7 591 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 DPF2Q92785 391 aa32.63■■■□□ 2.81
CTDNEP1-210ENST00000574322 A0A1B0GVL5 298 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 TRAPPC10P48553 1259 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 SPDYE2Q495Y8 402 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 KRI1Q8N9T8 703 aaKnown RBP32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZBED3Q96IU2 234 aaPredicted RBP32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 NYAP2Q9P242 653 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZNF70Q9UC06 446 aaPredicted RBP32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 NOL7Q9UMY1 257 aaKnown RBP32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 HPSEQ9Y251 543 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 PCDHB6Q9Y5E3 794 aa32.62■■■□□ 2.81
CTDNEP1-210ENST00000574322 BMP15O95972 392 aa32.61■■■□□ 2.81
CTDNEP1-210ENST00000574322 EARS2Q5JPH6 523 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-210ENST00000574322 ANP32BQ92688 251 aaKnown RBP32.61■■■□□ 2.81
CTDNEP1-210ENST00000574322 KANSL2Q9H9L4 492 aa32.61■■■□□ 2.81
CTDNEP1-210ENST00000574322 PCDHA4Q9UN74 947 aa32.61■■■□□ 2.81
CTDNEP1-210ENST00000574322 MYH4Q9Y623 1939 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 TRIM75PA6NK02 468 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 PTPREP23469 700 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 RESP18Q5W5W9 173 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 WWC2Q6AWC2 1192 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 RASGRP2Q7LDG7 609 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 PPP1R9BQ96SB3 815 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 TRIM34Q9BYJ4 488 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 MTMR7Q9Y216 660 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 STXBP3O00186 592 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 TYRO3Q06418 890 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 SHC4Q6S5L8 630 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 CKAP2LQ8IYA6 745 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 BLIDQ8IZY5 108 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 LRRC47Q8N1G4 583 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZNF579Q8NAF0 562 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 FAM151AQ8WW52 585 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 PIBF1Q8WXW3 757 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 RRP36Q96EU6 259 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 L3MBTL3Q96JM7 780 aaPredicted RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 TIGD1Q96MW7 591 aa32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 HERC5Q9UII4 1024 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 CNOT7Q9UIV1 285 aaKnown RBP32.6■■■□□ 2.81
CTDNEP1-210ENST00000574322 M0R2N6 131 aa32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 PFKFB1P16118 471 aa32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 LMOD1P29536 600 aaPredicted RBP32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 MICALL2Q8IY33 904 aa32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 RNF214Q8ND24 703 aa32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 GPKOWQ92917 476 aaPredicted RBP eCLIP32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 GPRC5DQ9NZD1 345 aa32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 FBXO2Q9UK22 296 aaPredicted RBP32.59■■■□□ 2.81
CTDNEP1-210ENST00000574322 FAM205CA6NFA0 338 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 hCG_1984214I3L0E3 225 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 MPHOSPH10O00566 681 aaKnown RBP32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZNF543Q08ER8 600 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 CCDC173Q0VFZ6 552 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 TYW1BQ6NUM6 668 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 TMEM179Q6ZVK1 233 aa32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 ZNF713Q8N859 430 aaPredicted RBP32.58■■■□□ 2.81
CTDNEP1-210ENST00000574322 SLURP2P0DP57 97 aa32.57■■■□□ 2.81
CTDNEP1-210ENST00000574322 CLEC10AQ8IUN9 316 aa32.57■■■□□ 2.81
CTDNEP1-210ENST00000574322 CCDC12Q8WUD4 166 aaPredicted RBP32.57■■■□□ 2.81
CTDNEP1-210ENST00000574322 SRPRBQ9Y5M8 271 aaKnown RBP32.57■■■□□ 2.81
CTDNEP1-210ENST00000574322 GPATCH4Q5T3I0 446 aaKnown RBP32.57■■■□□ 2.8
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms