RNA–Protein interactions for RNA: ENST00000566583.5

SNHG20-204, Transcript of small nucleolar RNA host gene 20, humanhuman

TSL 1 (best) BASIC

Gene SNHG20, Length 1,338 nt, Biotype sense overlapping, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG20-204ENST00000566583 FAM155AB1AL88 458 aaPredicted RBP18.07■□□□□ 0.48
SNHG20-204ENST00000566583 SLC10A3P09131 477 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 METAP2P50579 478 aaKnown RBP eCLIP18.07■□□□□ 0.48
SNHG20-204ENST00000566583 HMGCS2P54868 508 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 ZYXQ15942 572 aaKnown RBP18.07■□□□□ 0.48
SNHG20-204ENST00000566583 SYNE3Q6ZMZ3 975 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 NECAB1Q8N987 351 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 NUP133Q8WUM0 1156 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 FEZ1Q99689 392 aa18.07■□□□□ 0.48
SNHG20-204ENST00000566583 SLKQ9H2G2 1235 aaPredicted RBP18.07■□□□□ 0.48
SNHG20-204ENST00000566583 RASSF10A6NK89 507 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 WDR46O15213 610 aaKnown RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 CTDNEP1O95476 244 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 VCAM1P19320 739 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 ADD1P35611 737 aaKnown RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 CCT2P78371 535 aaKnown RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 STK3Q13188 491 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 RTN1Q16799 776 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 ASPRV1Q53RT3 343 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 BTNL9Q6UXG8 535 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 TMTC3Q6ZXV5 915 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 CCDC144CPQ8IYA2 1237 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 SPICE1Q8N0Z3 855 aa18.06■□□□□ 0.48
SNHG20-204ENST00000566583 PROCA1Q8NCQ7 364 aaPredicted RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 NUP88Q99567 741 aaPredicted RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 RBM28Q9NW13 759 aaKnown RBP18.06■□□□□ 0.48
SNHG20-204ENST00000566583 THSD7BQ9C0I4 1608 aa18.05■□□□□ 0.48
SNHG20-204ENST00000566583 PLA2G6O60733 806 aa18.05■□□□□ 0.48
SNHG20-204ENST00000566583 PARP1P09874 1014 aaKnown RBP18.05■□□□□ 0.48
SNHG20-204ENST00000566583 BMP3P12645 472 aa18.05■□□□□ 0.48
SNHG20-204ENST00000566583 GPATCH4Q5T3I0 446 aaKnown RBP18.05■□□□□ 0.48
SNHG20-204ENST00000566583 NBPF11Q86T75 865 aa18.05■□□□□ 0.48
SNHG20-204ENST00000566583 HSCBQ8IWL3 235 aa18.05■□□□□ 0.48
SNHG20-204ENST00000566583 CTCFLQ8NI51 663 aaPredicted RBP18.05■□□□□ 0.48
SNHG20-204ENST00000566583 TESPA1A2RU30 521 aaPredicted RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 CYTH3O43739 400 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 PLEKHA8P1O95397 391 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 GOLGA8HP0CJ92 632 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 SMARCA1P28370 1054 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 KIF5BP33176 963 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 SLC1A4P43007 532 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 ZNF157P51786 506 aaPredicted RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 SNAPC2Q13487 334 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 FAM83BQ5T0W9 1011 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 TTBK2Q6IQ55 1244 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 GPAT2Q6NUI2 795 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 KCTD1Q719H9 257 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 SRBD1Q8N5C6 995 aaKnown RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 ZBTB4Q9P1Z0 1013 aaPredicted RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 ABT1Q9ULW3 272 aaKnown RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 NAP1L2Q9ULW6 460 aaPredicted RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 MTMR7Q9Y216 660 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 FRMPD2Q68DX3 1309 aaPredicted RBP18.04■□□□□ 0.48
SNHG20-204ENST00000566583 CNTNAP5Q8WYK1 1306 aa18.04■□□□□ 0.48
SNHG20-204ENST00000566583 CCDC196A0A1B0GTZ2 297 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 KLRF2D3W0D1 207 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 IFNAR1P17181 557 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 GTF2A2P52657 109 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 CCDC83Q8IWF9 413 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 NSUN7Q8NE18 718 aaKnown RBP18.03■□□□□ 0.48
SNHG20-204ENST00000566583 SMARCC2Q8TAQ2 1214 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 CHMP4CQ96CF2 233 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 SPZ1Q9BXG8 430 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 RIOX1Q9H6W3 641 aa18.03■□□□□ 0.48
SNHG20-204ENST00000566583 HOXA7P31268 230 aaPredicted RBP18.02■□□□□ 0.48
SNHG20-204ENST00000566583 ANP32AP39687 249 aaKnown RBP18.02■□□□□ 0.48
SNHG20-204ENST00000566583 GNAQP50148 359 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 TREML2Q5T2D2 321 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 CATSPERGQ6ZRH7 1159 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 BRI3BPQ8WY22 251 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 CCDC102AQ96A19 550 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 MTMR8Q96EF0 704 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 LZTS2Q9BRK4 669 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 CPVLQ9H3G5 476 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 RPAP3Q9H6T3 665 aaPredicted RBP18.02■□□□□ 0.48
SNHG20-204ENST00000566583 GPCPD1Q9NPB8 672 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 TMOD4Q9NZQ9 345 aa18.02■□□□□ 0.48
SNHG20-204ENST00000566583 CETPP11597 493 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 CCDC96Q2M329 555 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 FASTKD5Q7L8L6 764 aaKnown RBP18.01■□□□□ 0.47
SNHG20-204ENST00000566583 CMTR1Q8N1G2 835 aaKnown RBP18.01■□□□□ 0.47
SNHG20-204ENST00000566583 INTS4Q96HW7 963 aaKnown RBP18.01■□□□□ 0.47
SNHG20-204ENST00000566583 LLPHQ9BRT6 129 aaKnown RBP18.01■□□□□ 0.47
SNHG20-204ENST00000566583 UBA5Q9GZZ9 404 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 FBXO28Q9NVF7 368 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 FEM1BQ9UK73 627 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 AGTPBP1Q9UPW5 1226 aa18.01■□□□□ 0.47
SNHG20-204ENST00000566583 TMEM232C9JQI7 657 aa18■□□□□ 0.47
SNHG20-204ENST00000566583 RAD21O60216 631 aa18■□□□□ 0.47
SNHG20-204ENST00000566583 DHX16O60231 1041 aaKnown RBP18■□□□□ 0.47
SNHG20-204ENST00000566583 MKRN3Q13064 507 aaKnown RBP18■□□□□ 0.47
SNHG20-204ENST00000566583 BECN1Q14457 450 aa18■□□□□ 0.47
SNHG20-204ENST00000566583 PTPN18Q99952 460 aa18■□□□□ 0.47
SNHG20-204ENST00000566583 ADAMTS5Q9UNA0 930 aa18■□□□□ 0.47
SNHG20-204ENST00000566583 CCL15-CCL14A0A0B4J2E2 113 aa17.99■□□□□ 0.47
SNHG20-204ENST00000566583 MANSC4A6NHS7 340 aaPredicted RBP17.99■□□□□ 0.47
SNHG20-204ENST00000566583 USP17L15C9J2P7 530 aa17.99■□□□□ 0.47
SNHG20-204ENST00000566583 USP17L13C9JLJ4 530 aa17.99■□□□□ 0.47
SNHG20-204ENST00000566583 USP17L11C9JVI0 530 aa17.99■□□□□ 0.47
SNHG20-204ENST00000566583 USP17L18D6R9N7 530 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms