RNA–Protein interactions for RNA: ENST00000566560.5

KARS-207, Transcript of lysyl-tRNA synthetase, humanhuman

TSL 1 (best)

Gene KARS, Length 1,231 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KARS-207ENST00000566560 TBC1D32Q96NH3 1257 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 LRRC2Q9BYS8 371 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 UPF3BQ9BZI7 483 aaKnown RBP13.47□□□□□ -0.25
KARS-207ENST00000566560 GOPCQ9HD26 462 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 TMOD4Q9NZQ9 345 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 CLIP2Q9UDT6 1046 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 SYNPO2Q9UMS6 1093 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 TMX2Q9Y320 296 aa13.47□□□□□ -0.25
KARS-207ENST00000566560 PARP14Q460N5 1801 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 C19orf81C9J6K1 198 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 SH2B2O14492 632 aaPredicted RBP13.46□□□□□ -0.25
KARS-207ENST00000566560 AOC2O75106 756 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 RPS6KB1P23443 525 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 NOVP48745 357 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 SREBF2Q12772 1141 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 WTAPQ15007 396 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 SEC23AQ15436 765 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 SH3D19Q5HYK7 790 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 RCSD1Q6JBY9 416 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 USP17L2Q6R6M4 530 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 DGKHQ86XP1 1220 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 SIAH1Q8IUQ4 282 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 IL17RAQ96F46 866 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 TMEM47Q9BQJ4 181 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 MTA3Q9BTC8 594 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 TM6SF1Q9BZW5 370 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 VCPKMTQ9H867 229 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 KAT14Q9H8E8 782 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 CYP46A1Q9Y6A2 500 aa13.46□□□□□ -0.25
KARS-207ENST00000566560 VCAM1P19320 739 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 FGD1P98174 961 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 KIF23Q02241 960 aaPredicted RBP13.45□□□□□ -0.26
KARS-207ENST00000566560 RUFY3Q7L099 469 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 FASTKD5Q7L8L6 764 aaKnown RBP13.45□□□□□ -0.26
KARS-207ENST00000566560 SPICE1Q8N0Z3 855 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 PROCA1Q8NCQ7 364 aaPredicted RBP13.45□□□□□ -0.26
KARS-207ENST00000566560 GMCL1P1Q8NEA9 526 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 BRI3BPQ8WY22 251 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 LPAR1Q92633 364 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 C12orf42Q96LP6 360 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 TTC14Q96N46 770 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 ZIC5Q96T25 663 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 LY9Q9HBG7 655 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 ZSWIM6Q9HCJ5 1215 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 EMILIN3Q9NT22 766 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 MTMR7Q9Y216 660 aa13.45□□□□□ -0.26
KARS-207ENST00000566560 NDUFB10O96000 172 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 EXOSC10Q01780 885 aaKnown RBP13.44□□□□□ -0.26
KARS-207ENST00000566560 NFXL1Q6ZNB6 911 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 RASGRP2Q7LDG7 609 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 PNMA1Q8ND90 353 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 IGDCC4Q8TDY8 1250 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 ANKS1AQ92625 1134 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 MKL1Q969V6 931 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 SENP2Q9HC62 589 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 ISY1Q9ULR0 285 aaKnown RBP13.44□□□□□ -0.26
KARS-207ENST00000566560 AGTPBP1Q9UPW5 1226 aa13.44□□□□□ -0.26
KARS-207ENST00000566560 A0A0G2JMZ2 1700 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 CCDC69A6NI79 296 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 F5H6K3 240 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 POTEB2H3BUK9 544 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 WDR46O15213 610 aaKnown RBP13.43□□□□□ -0.26
KARS-207ENST00000566560 KLRC3Q07444 240 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 MOGSQ13724 837 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 CCDC96Q2M329 555 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 KIAA1755Q5JYT7 1200 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 TREML2Q5T2D2 321 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 SLFN13Q68D06 897 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 TMEM92Q6UXU6 159 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 Q6ZUG5 572 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 PDRG1Q9NUG6 133 aa13.43□□□□□ -0.26
KARS-207ENST00000566560 TESPA1A2RU30 521 aaPredicted RBP13.42□□□□□ -0.26
KARS-207ENST00000566560 C2orf72A6NCS6 295 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 BTBD19C9JJ37 291 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 IGF2BP3O00425 579 aaKnown RBP eCLIP13.42□□□□□ -0.26
KARS-207ENST00000566560 MAP2K2P36507 400 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 LIFRP42702 1097 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 SLC1A4P43007 532 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 FAM83BQ5T0W9 1011 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 CATIPQ7Z7H3 387 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 ANKRD23Q86SG2 305 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 BRF1Q92994 677 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 CHMP4CQ96CF2 233 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 GMCL1Q96IK5 515 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 NUP88Q99567 741 aaPredicted RBP13.42□□□□□ -0.26
KARS-207ENST00000566560 KIF2CQ99661 725 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 TANGO6Q9C0B7 1094 aa13.42□□□□□ -0.26
KARS-207ENST00000566560 RPAP3Q9H6T3 665 aaPredicted RBP13.42□□□□□ -0.26
KARS-207ENST00000566560 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.42□□□□□ -0.26
KARS-207ENST00000566560 RLFQ13129 1914 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 DDAH1O94760 285 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 PDHBP11177 359 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 INHBEP58166 350 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 IRX3P78415 501 aaPredicted RBP13.41□□□□□ -0.26
KARS-207ENST00000566560 FOXK1P85037 733 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 PABPC4Q13310 644 aaKnown RBP eCLIP13.41□□□□□ -0.26
KARS-207ENST00000566560 RABEP1Q15276 862 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 GPAT2Q6NUI2 795 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 SGMS1Q86VZ5 419 aa13.41□□□□□ -0.26
KARS-207ENST00000566560 MICU3Q86XE3 530 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 148.7 ms