RNA–Protein interactions for RNA: ENST00000563416.3

LINC00254-201, long intergenic non-protein coding RNA 254, humanhuman

TSL 3 BASIC

Gene LINC00254, Length 662 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00254-201ENST00000563416 ZNF512BQ96KM6 892 aaPredicted RBP7.75□□□□□ -1.17
LINC00254-201ENST00000563416 BIN1O00499 593 aa7.74□□□□□ -1.17
LINC00254-201ENST00000563416 BBS9Q3SYG4 887 aa7.74□□□□□ -1.17
LINC00254-201ENST00000563416 C19orf47Q8N9M1 422 aaKnown RBP7.74□□□□□ -1.17
LINC00254-201ENST00000563416 IGSF5Q9NSI5 407 aa7.74□□□□□ -1.17
LINC00254-201ENST00000563416 MBNL3Q9NUK0 354 aaKnown RBP7.74□□□□□ -1.17
LINC00254-201ENST00000563416 PCDHB12Q9Y5F1 795 aa7.74□□□□□ -1.17
LINC00254-201ENST00000563416 SSBP05455 408 aaKnown RBP eCLIP7.73□□□□□ -1.17
LINC00254-201ENST00000563416 PMS1P54277 932 aaKnown RBP7.73□□□□□ -1.17
LINC00254-201ENST00000563416 GAB4Q2WGN9 574 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 MCTP1Q6DN14 999 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 UNC5AQ6ZN44 842 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 RUFY4Q6ZNE9 571 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 CCDC144CPQ8IYA2 1237 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 SYTL5Q8TDW5 730 aaPredicted RBP7.73□□□□□ -1.17
LINC00254-201ENST00000563416 ALPK1Q96QP1 1244 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 PRDM7Q9NQW5 492 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 ADAMTS6Q9UKP5 1117 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 FBXL21Q9UKT6 434 aa7.73□□□□□ -1.17
LINC00254-201ENST00000563416 SHISA3A0PJX4 238 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 ESR1P03372 595 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 TAL1P17542 331 aaPredicted RBP7.72□□□□□ -1.17
LINC00254-201ENST00000563416 EGR3Q06889 387 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 ATG4DQ86TL0 474 aaPredicted RBP7.72□□□□□ -1.17
LINC00254-201ENST00000563416 DAGLBQ8NCG7 672 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 LRRN4CLQ8ND94 238 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 SHDQ96IW2 340 aa7.72□□□□□ -1.17
LINC00254-201ENST00000563416 WASH4PA8MWX3 477 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 SIGLEC6O43699 453 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 JUNBP17275 347 aaPredicted RBP7.71□□□□□ -1.18
LINC00254-201ENST00000563416 ARID5AQ03989 594 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 AUHQ13825 339 aaKnown RBP7.71□□□□□ -1.18
LINC00254-201ENST00000563416 PPP2R5EQ16537 467 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 TTC6Q86TZ1 520 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 ZNF655Q8N720 491 aaPredicted RBP7.71□□□□□ -1.18
LINC00254-201ENST00000563416 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.71□□□□□ -1.18
LINC00254-201ENST00000563416 TINF2Q9BSI4 451 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 HDAC8Q9BY41 377 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 PRDM14Q9GZV8 571 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 PHAXQ9H814 394 aaKnown RBP7.71□□□□□ -1.18
LINC00254-201ENST00000563416 PRR13Q9NZ81 148 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 CADPSQ9ULU8 1353 aa7.71□□□□□ -1.18
LINC00254-201ENST00000563416 CFTRP13569 1480 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 ERCC6Q03468 1493 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 SSU72P8A0A1W2PR75 194 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 RBAK-RBAKDNI3L0D1 243 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 ZYXQ15942 572 aaKnown RBP7.7□□□□□ -1.18
LINC00254-201ENST00000563416 TMC3Q7Z5M5 1100 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 C7orf61Q8IZ16 206 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 ANAPC16Q96DE5 110 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 SLAMF8Q9P0V8 285 aa7.7□□□□□ -1.18
LINC00254-201ENST00000563416 ZNF214Q9UL59 606 aaPredicted RBP7.7□□□□□ -1.18
LINC00254-201ENST00000563416 CCDC88BA6NC98 1476 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 C9IYK1 514 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 CASP7P55210 303 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 SNW1Q13573 536 aaKnown RBP7.69□□□□□ -1.18
LINC00254-201ENST00000563416 TDRD10Q5VZ19 366 aaKnown RBP7.69□□□□□ -1.18
LINC00254-201ENST00000563416 SLC43A3Q8NBI5 491 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 FLAD1Q8NFF5 587 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 DHX38Q92620 1227 aaKnown RBP7.69□□□□□ -1.18
LINC00254-201ENST00000563416 CHST7Q9NS84 486 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 TMEM59LQ9UK28 342 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 PCDHA11Q9Y5I1 949 aa7.69□□□□□ -1.18
LINC00254-201ENST00000563416 A0A1W2PQH9 124 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 PRAMEF1O95521 474 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 ITGB5P18084 799 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 DNAJA1P31689 397 aaKnown RBP7.68□□□□□ -1.18
LINC00254-201ENST00000563416 GDNFP39905 211 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 AFMP43652 599 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 PCBP3P57721 371 aaKnown RBP7.68□□□□□ -1.18
LINC00254-201ENST00000563416 ZC3H6P61129 1189 aaKnown RBP7.68□□□□□ -1.18
LINC00254-201ENST00000563416 ANKRD39Q53RE8 183 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 TNNI3KQ59H18 835 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 RNF111Q6ZNA4 994 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 ASIC4Q96FT7 647 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 TCTN2Q96GX1 697 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 DSCC1Q9BVC3 393 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 CTNND2Q9UQB3 1225 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 PDS5BQ9NTI5 1447 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 CUX2O14529 1486 aa7.68□□□□□ -1.18
LINC00254-201ENST00000563416 TP53P04637 393 aaPredicted RBP7.67□□□□□ -1.18
LINC00254-201ENST00000563416 RAC2P15153 192 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 ENDOUP21128 410 aaKnown RBP7.67□□□□□ -1.18
LINC00254-201ENST00000563416 SLC7A5Q01650 507 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 TCEAL1Q15170 157 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 GNPTABQ3T906 1256 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 NOL9Q5SY16 702 aaKnown RBP7.67□□□□□ -1.18
LINC00254-201ENST00000563416 PPFIBP1Q86W92 1011 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 GFOD1Q9NXC2 390 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 LTBP3Q9NS15 1303 aa7.67□□□□□ -1.18
LINC00254-201ENST00000563416 PAX4O43316 350 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 DUSP4Q13115 394 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 AXDND1Q5T1B0 1012 aaPredicted RBP7.66□□□□□ -1.18
LINC00254-201ENST00000563416 DCAF15Q66K64 600 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 LINC00116Q8NCU8 138 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 FAM86C1Q9NVL1 165 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 TCFL5Q9UL49 500 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 WDR62O43379 1518 aa7.66□□□□□ -1.18
LINC00254-201ENST00000563416 DNAJC25-GNG10A0A024R161 153 aa7.65□□□□□ -1.18
LINC00254-201ENST00000563416 PAPLNO95428 1278 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms