RNA–Protein interactions for RNA: ENST00000562702.2

HDGFL3-202, Transcript of HDGF like 3, humanhuman

TSL 5

Gene HDGFL3, Length 449 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-202ENST00000562702 KREMEN1Q96MU8 473 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 SETDB2Q96T68 719 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 EBF1Q9UH73 591 aa5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 GNEQ9Y223 722 aaKnown RBP5.88□□□□□ -1.47
HDGFL3-202ENST00000562702 LRRN2O75325 713 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 USP2O75604 605 aaPredicted RBP5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 PCBP3P57721 371 aaKnown RBP5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 VMACQ2NL98 169 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 SLFN12Q8IYM2 578 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 NLGN1Q8N2Q7 840 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 LINC01356Q8N9X3 169 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 MAP6Q96JE9 813 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 CCDC74BQ96LY2 380 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 ASB16Q96NS5 453 aa5.87□□□□□ -1.47
HDGFL3-202ENST00000562702 UPK3BL1B0FP48 263 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 UPK3BL2E5RIL1 263 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 RBAK-RBAKDNI3L0D1 243 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 IRS4O14654 1257 aaPredicted RBP5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 CILPO75339 1184 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 KRTAP10-2P60368 255 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 YBX1P67809 324 aaKnown RBP5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 EFEMP1Q12805 493 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 TMEM201Q5SNT2 666 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 FAM129CQ86XR2 697 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 SYTL5Q8TDW5 730 aaPredicted RBP5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 PWWP2AQ96N64 755 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 GPR20Q99678 358 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 G6PC3Q9BUM1 346 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 BDH2Q9BUT1 245 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 ZNF281Q9Y2X9 895 aa5.86□□□□□ -1.47
HDGFL3-202ENST00000562702 SHISA3A0PJX4 238 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 LDHBP07195 334 aaKnown RBP5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 GNA15P30679 374 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 NMIQ13287 307 aaPredicted RBP5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 GALNT18Q6P9A2 607 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 CCDC84Q86UT8 332 aaPredicted RBP5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 PHACTR4Q8IZ21 702 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 SYT8Q8NBV8 401 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 CNOT11Q9UKZ1 510 aaKnown RBP5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 MYRFQ9Y2G1 1151 aa5.85□□□□□ -1.47
HDGFL3-202ENST00000562702 NOTOA8MTQ0 251 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 INSRRP14616 1297 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 ENDOUP21128 410 aaKnown RBP5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 GBP1P32455 592 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 CDR1P51861 262 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 RTP1P59025 263 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 ERVFRD-1P60508 538 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 RNF4P78317 190 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 LAPTM5Q13571 262 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 ZNF655Q8N720 491 aaPredicted RBP5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 DAGLBQ8NCG7 672 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 ADAM7Q9H2U9 754 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 EPB41L4AQ9HCS5 686 aaPredicted RBP5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 TCFL5Q9UL49 500 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 CORINQ9Y5Q5 1042 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 TAF6LQ9Y6J9 622 aa5.84□□□□□ -1.47
HDGFL3-202ENST00000562702 BRD1O95696 1058 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 TFE3P19532 575 aaPredicted RBP5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 KCNC1P48547 511 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 MLECQ14165 292 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 PUM1Q14671 1186 aaKnown RBP eCLIP5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 TMC6Q7Z403 805 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 LDHDQ86WU2 507 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 TMEFF1Q8IYR6 380 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 FOXP3Q9BZS1 431 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 TNFRSF10DQ9UBN6 386 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 KLHL3Q9UH77 587 aa5.83□□□□□ -1.48
HDGFL3-202ENST00000562702 WTIPA6NIX2 430 aaPredicted RBP5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 SDHBP21912 280 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 RAB3GAP1Q15042 981 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 ZNF827Q17R98 1081 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 UBXN11Q5T124 520 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 USHBP1Q8N6Y0 703 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 AK5Q9Y6K8 562 aa5.82□□□□□ -1.48
HDGFL3-202ENST00000562702 K7ESM1 405 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 PFKLP17858 780 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 CAP1Q01518 475 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 LINC00116Q8NCU8 138 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 TCTN2Q96GX1 697 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 HHIPL1Q96JK4 782 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 TRAIPQ9BWF2 469 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 HDAC8Q9BY41 377 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 REV1Q9UBZ9 1251 aa5.81□□□□□ -1.48
HDGFL3-202ENST00000562702 BUB1BO60566 1050 aaPredicted RBP5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 FKTNO75072 461 aa5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 RTP5Q14D33 572 aa5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 IGDCC3Q8IVU1 814 aa5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 FCRL2Q96LA5 508 aaPredicted RBP5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 NOC4LQ9BVI4 516 aaKnown RBP5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 USP40Q9NVE5 1235 aa5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 KLHL14Q9P2G3 628 aa5.8□□□□□ -1.48
HDGFL3-202ENST00000562702 PATL2C9JE40 543 aaKnown RBP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 PRPF40AO75400 957 aaKnown RBP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 P4HBP07237 508 aaKnown RBP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 SYPP08247 313 aa5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 PDIA4P13667 645 aaKnown RBP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 ZFYVE27Q5T4F4 411 aa5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 EAF1Q96JC9 268 aaPredicted RBP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP5.79□□□□□ -1.48
HDGFL3-202ENST00000562702 TLR6Q9Y2C9 796 aa5.79□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms