RNA–Protein interactions for RNA: ENST00000561268.5

SPG11-224, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

TSL 4

Gene SPG11, Length 530 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-224ENST00000561268 ICA1Q05084 483 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 GRB14Q14449 540 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 KIAA1755Q5JYT7 1200 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 TSHZ3Q63HK5 1081 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 CTR9Q6PD62 1173 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 GPR142Q7Z601 462 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 TICAM2Q86XR7 235 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 CLEC10AQ8IUN9 316 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 SMC5Q8IY18 1101 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 GPRC5AQ8NFJ5 357 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 OTUD7AQ8TE49 926 aaPredicted RBP8.25□□□□□ -1.09
SPG11-224ENST00000561268 DYNLL2Q96FJ2 89 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 CRBNQ96SW2 442 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 FEZ1Q99689 392 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 APBA2Q99767 749 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 VCPKMTQ9H867 229 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 CABP5Q9NP86 173 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 STAP2Q9UGK3 403 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 SYNPO2Q9UMS6 1093 aa8.25□□□□□ -1.09
SPG11-224ENST00000561268 CYP2D7A0A087X1C5 515 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 M0R2C6 588 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 ERC2O15083 957 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 WDR46O15213 610 aaKnown RBP8.24□□□□□ -1.09
SPG11-224ENST00000561268 RNF113AO15541 343 aaKnown RBP8.24□□□□□ -1.09
SPG11-224ENST00000561268 PEX10O60683 326 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 SGPL1O95470 568 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 GNAT2P19087 354 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 RASA1P20936 1047 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 RAB3GAP1Q15042 981 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 Q3C1V9 767 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 ZMYM1Q5SVZ6 1142 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 DHX30Q7L2E3 1194 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPG11-224ENST00000561268 TRMT44Q8IYL2 757 aaKnown RBP8.24□□□□□ -1.09
SPG11-224ENST00000561268 MB21D1Q8N884 522 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 PDCD7Q8N8D1 485 aaKnown RBP8.24□□□□□ -1.09
SPG11-224ENST00000561268 ANKLE1Q8NAG6 615 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 SHCBP1Q8NEM2 672 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 GCC1Q96CN9 775 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 XRN2Q9H0D6 950 aaKnown RBP eCLIP8.24□□□□□ -1.09
SPG11-224ENST00000561268 RNF208Q9H0X6 261 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 PRO3102Q9H379 93 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 RPAP3Q9H6T3 665 aaPredicted RBP8.24□□□□□ -1.09
SPG11-224ENST00000561268 BTBD7Q9P203 1132 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 ADAMTS5Q9UNA0 930 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 SLC4A4Q9Y6R1 1079 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 RPTORQ8N122 1335 aa8.24□□□□□ -1.09
SPG11-224ENST00000561268 RANBP2P49792 3224 aaKnown RBP8.23□□□□□ -1.09
SPG11-224ENST00000561268 FARP2O94887 1054 aaPredicted RBP8.23□□□□□ -1.09
SPG11-224ENST00000561268 MAP2K5Q13163 448 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 ZYXQ15942 572 aaKnown RBP8.23□□□□□ -1.09
SPG11-224ENST00000561268 REPS2Q8NFH8 660 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 HS3ST6Q96QI5 342 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 NUDT12Q9BQG2 462 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 SH2D4AQ9H788 454 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 ARHGEF10LQ9HCE6 1279 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 OGDHLQ9ULD0 1010 aa8.23□□□□□ -1.09
SPG11-224ENST00000561268 TANC1Q9C0D5 1861 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 FAM205CA6NFA0 338 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 SLC15A5A6NIM6 579 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 ECM2O94769 699 aaPredicted RBP8.22□□□□□ -1.09
SPG11-224ENST00000561268 PTPREP23469 700 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 RGS2P41220 211 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 NOVP48745 357 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 PDE1AP54750 535 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 CCNA1P78396 465 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 TRIM32Q13049 653 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 LRRFIP1Q32MZ4 808 aaKnown RBP8.22□□□□□ -1.09
SPG11-224ENST00000561268 PLEKHH3Q7Z736 793 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 AMOTL1Q8IY63 956 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 ABRAQ8N0Z2 381 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 PAGR1Q9BTK6 254 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 KRTAP3-3Q9BYR6 98 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 KRTAP3-2Q9BYR7 98 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 BCL11AQ9H165 835 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 KANSL2Q9H9L4 492 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 NYAP2Q9P242 653 aa8.22□□□□□ -1.09
SPG11-224ENST00000561268 ZNF214Q9UL59 606 aaPredicted RBP8.22□□□□□ -1.09
SPG11-224ENST00000561268 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.22□□□□□ -1.09
SPG11-224ENST00000561268 FGRP09769 529 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 COL6A1P12109 1028 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 CYBAP13498 195 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 EEF2P13639 858 aaKnown RBP8.21□□□□□ -1.1
SPG11-224ENST00000561268 ZKSCAN1P17029 563 aaPredicted RBP8.21□□□□□ -1.1
SPG11-224ENST00000561268 COG2Q14746 738 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 CCL14Q16627 93 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 OLFML2BQ68BL8 750 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 ATG4CQ96DT6 458 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 DEFB118Q96PH6 123 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 SEC62Q99442 399 aaKnown RBP8.21□□□□□ -1.1
SPG11-224ENST00000561268 MOV10L1Q9BXT6 1211 aaKnown RBP8.21□□□□□ -1.1
SPG11-224ENST00000561268 SPATC1LQ9H0A9 340 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 OSBPL3Q9H4L5 887 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 HMX1Q9NP08 348 aaPredicted RBP8.21□□□□□ -1.1
SPG11-224ENST00000561268 FLRT1Q9NZU1 646 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 ANAPC4Q9UJX5 808 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 PFASO15067 1338 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 GBF1Q92538 1859 aa8.21□□□□□ -1.1
SPG11-224ENST00000561268 LAMA3Q16787 3333 aa8.2□□□□□ -1.1
SPG11-224ENST00000561268 PATL2C9JE40 543 aaKnown RBP8.2□□□□□ -1.1
SPG11-224ENST00000561268 MPHOSPH10O00566 681 aaKnown RBP8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms