RNA–Protein interactions for RNA: ENST00000560562.5

TNFAIP2-207, Transcript of TNF alpha induced protein 2, humanhuman

TSL 1 (best)

Gene TNFAIP2, Length 1,429 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFAIP2-207ENST00000560562 NEFLP07196 543 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 ZKSCAN1P17029 563 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 MNX1P50219 401 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 IRX6P78412 446 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 CACNB2Q08289 660 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 SAMD1Q6SPF0 538 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 ZNF589Q86UQ0 364 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 NPLOC4Q8TAT6 608 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 CEP95Q96GE4 821 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 NYAP2Q9P242 653 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 ADAMTS5Q9UNA0 930 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 MCM3APO60318 1980 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 SLC15A5A6NIM6 579 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 IGHA2P01877 340 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 ERCC3P19447 782 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 CCND3P30281 292 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 CTDSPL2Q05D32 466 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 NMIQ13287 307 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 TMEM132BQ14DG7 1078 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 FAM47AQ5JRC9 791 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 REPS2Q8NFH8 660 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 NACAP1Q9BZK3 213 aa16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 HMX1Q9NP08 348 aaPredicted RBP16.7■□□□□ 0.26
TNFAIP2-207ENST00000560562 RAD21O60216 631 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 NDUFB10O96000 172 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 TFRCP02786 760 aaKnown RBP16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 HOXC6P09630 235 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 CWC22Q9HCG8 908 aaKnown RBP16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 GOPCQ9HD26 462 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 MTMR4Q9NYA4 1195 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 CLIP2Q9UDT6 1046 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 PPP1R9AQ9ULJ8 1098 aa16.69■□□□□ 0.26
TNFAIP2-207ENST00000560562 F5H6K3 240 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 KLRC3Q07444 240 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 PLS1Q14651 629 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 LRRC47Q8N1G4 583 aaKnown RBP16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 MB21D1Q8N884 522 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 SHCBP1Q8NEM2 672 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 NEDD1Q8NHV4 660 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 OSBPL3Q9H4L5 887 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 HELLSQ9NRZ9 838 aa16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 ZNF214Q9UL59 606 aaPredicted RBP16.68■□□□□ 0.26
TNFAIP2-207ENST00000560562 H0YGN5 161 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 VWA5AO00534 786 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 COBLO75128 1261 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 ADORA2AP29274 412 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 ZNF444Q8N0Y2 327 aaPredicted RBP16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 MKL1Q969V6 931 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 PAWRQ96IZ0 340 aaKnown RBP16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 IVNS1ABPQ9Y6Y0 642 aa16.67■□□□□ 0.26
TNFAIP2-207ENST00000560562 TRIM6-TRIM34B2RNG4 842 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 NMT2O60551 498 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 PDE4AP27815 886 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 TFAP4Q01664 338 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 MCMDC2Q4G0Z9 681 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 LHX8Q68G74 356 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 RASGRP2Q7LDG7 609 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 NCAPG2Q86XI2 1143 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 TRMT44Q8IYL2 757 aaKnown RBP16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 TRPV1Q8NER1 839 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 RILPL2Q969X0 211 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 NBPF3Q9H094 633 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 ANAPC4Q9UJX5 808 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 OGDHLQ9ULD0 1010 aa16.66■□□□□ 0.26
TNFAIP2-207ENST00000560562 FGAP02671 866 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 TSPY3P0CV98 308 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 TSPY8P0CW00 308 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 HSPD1P10809 573 aaKnown RBP16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 CYP2C19P33261 490 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 PDE4BQ07343 736 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 ALX1Q15699 326 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 ERICH6BQ5W0A0 696 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 ZNF287Q9HBT7 754 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 IL17RBQ9NRM6 502 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 LCTP09848 1927 aa16.65■□□□□ 0.26
TNFAIP2-207ENST00000560562 CCDC171Q6TFL3 1326 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 TTLL1O95922 423 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 SDSP20132 328 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 RIOX2Q8IUF8 465 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 DPF3Q92784 378 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLF1Q9BQI6 1058 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 MROH8Q9H579 483 aa16.64■□□□□ 0.25
TNFAIP2-207ENST00000560562 STRNO43815 780 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 FGRP09769 529 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 GMCL1P1Q8NEA9 526 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 CHMP4CQ96CF2 233 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 RIPK3Q9Y572 518 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 PFASO15067 1338 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 ZMYM6O95789 1325 aa16.63■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLC34A2O95436 690 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 SLC3A2P08195 630 aaKnown RBP16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 CYBAP13498 195 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 STAT3P40763 770 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 DPP9Q86TI2 863 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 TICAM2Q86XR7 235 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 ANKLE1Q8NAG6 615 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 HTATIP2Q9BUP3 242 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 IL25Q9H293 177 aa16.62■□□□□ 0.25
TNFAIP2-207ENST00000560562 LAMA2P24043 3122 aaKnown RBP16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms