RNA–Protein interactions for RNA: ENST00000559397.5

TPM1-219, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,655 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-219ENST00000559397 CATIPQ7Z7H3 387 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 C12orf42Q96LP6 360 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 GOPCQ9HD26 462 aa19.25■□□□□ 0.67
TPM1-219ENST00000559397 RASSF10A6NK89 507 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 CTDNEP1O95476 244 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 PDCP20941 246 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 SLFN13Q68D06 897 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 USP17L2Q6R6M4 530 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 RASGRP2Q7LDG7 609 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 NSUN7Q8NE18 718 aaKnown RBP19.24■□□□□ 0.67
TPM1-219ENST00000559397 MYL10Q9BUA6 226 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 LOC285556D6RIA3 1793 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 JAK2O60674 1132 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 DDAH1O94760 285 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 ZSCAN22P10073 491 aaPredicted RBP19.24■□□□□ 0.67
TPM1-219ENST00000559397 PDHBP11177 359 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 HMGCS2P54868 508 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 MKRN3Q13064 507 aaKnown RBP19.24■□□□□ 0.67
TPM1-219ENST00000559397 MOGSQ13724 837 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 CCDC102AQ96A19 550 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 MS4A4AQ96JQ5 239 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 MTMR6Q9Y217 621 aa19.24■□□□□ 0.67
TPM1-219ENST00000559397 ZBTB43O43298 467 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 DTNBO60941 627 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 C1QTNF8P60827 252 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 CCT2P78371 535 aaKnown RBP19.23■□□□□ 0.67
TPM1-219ENST00000559397 SNAPC2Q13487 334 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 DEFB115Q30KQ5 88 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 RAB11FIP4Q86YS3 637 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 SPICE1Q8N0Z3 855 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 DCAF4Q8WV16 495 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 LPAR1Q92633 364 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 GMCL1Q96IK5 515 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 MAP3K14Q99558 947 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 MTMR7Q9Y216 660 aa19.23■□□□□ 0.67
TPM1-219ENST00000559397 GOLGA8BA8MQT2 603 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 RXRAP19793 462 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 RCAN1P53805 252 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 HMGN5P82970 282 aaKnown RBP19.22■□□□□ 0.67
TPM1-219ENST00000559397 SYNE3Q6ZMZ3 975 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 MICU3Q86XE3 530 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 NUP133Q8WUM0 1156 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 NCOA5Q9HCD5 579 aaKnown RBP19.22■□□□□ 0.67
TPM1-219ENST00000559397 NID2Q14112 1375 aa19.22■□□□□ 0.67
TPM1-219ENST00000559397 CALM1P0DP23 149 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 CALM2P0DP24 149 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 CALM3P0DP25 149 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 VCAM1P19320 739 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 GTF2A2P52657 109 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 GRM4Q14833 912 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 LARP1BQ659C4 914 aaKnown RBP19.21■□□□□ 0.67
TPM1-219ENST00000559397 CYP4F22Q6NT55 531 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 TMOD4Q9NZQ9 345 aa19.21■□□□□ 0.67
TPM1-219ENST00000559397 WDR46O15213 610 aaKnown RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 RAD21O60216 631 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 DHX16O60231 1041 aaKnown RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 PTMSP20962 102 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 SLC1A4P43007 532 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 HTRA3P83110 453 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 PROCA1Q8NCQ7 364 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 NUP88Q99567 741 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 FAM217BQ9NTX9 383 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 MAD2L2Q9UI95 211 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 NAP1L2Q9ULW6 460 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 PTPDC1A2A3K4 754 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 TESPA1A2RU30 521 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 PALM3A6NDB9 673 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 BMP3P12645 472 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 ZNF543Q08ER8 600 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 FOXD4L5Q5VV16 416 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 CCDC144CPQ8IYA2 1237 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 FANCBQ8NB91 859 aa19.2■□□□□ 0.66
TPM1-219ENST00000559397 FOXD4L4Q8WXT5 416 aaPredicted RBP19.2■□□□□ 0.66
TPM1-219ENST00000559397 FRMPD2Q68DX3 1309 aaPredicted RBP19.19■□□□□ 0.66
TPM1-219ENST00000559397 F13A1P00488 732 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 PARP1P09874 1014 aaKnown RBP19.19■□□□□ 0.66
TPM1-219ENST00000559397 METAP2P50579 478 aaKnown RBP eCLIP19.19■□□□□ 0.66
TPM1-219ENST00000559397 FAM83BQ5T0W9 1011 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 TREML2Q5T2D2 321 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 GPAT2Q6NUI2 795 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 GADL1Q6ZQY3 521 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 KCTD1Q719H9 257 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 FASTKD5Q7L8L6 764 aaKnown RBP19.19■□□□□ 0.66
TPM1-219ENST00000559397 STAG2Q8N3U4 1231 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 BRI3BPQ8WY22 251 aa19.19■□□□□ 0.66
TPM1-219ENST00000559397 CCL15-CCL14A0A0B4J2E2 113 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 GOLGA8AA7E2F4 631 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 GOLGA6L22H0YM25 854 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 GOLGA8HP0CJ92 632 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 CETPP11597 493 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 HSPA6P17066 643 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 CDC27P30260 824 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 CCL15Q16663 113 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 RTN1Q16799 776 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 ASPRV1Q53RT3 343 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 PAXIP1Q6ZW49 1069 aaPredicted RBP19.18■□□□□ 0.66
TPM1-219ENST00000559397 CTCFLQ8NI51 663 aaPredicted RBP19.18■□□□□ 0.66
TPM1-219ENST00000559397 CAPNS2Q96L46 248 aa19.18■□□□□ 0.66
TPM1-219ENST00000559397 RPAP3Q9H6T3 665 aaPredicted RBP19.18■□□□□ 0.66
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms