RNA–Protein interactions for RNA: ENST00000558868.5

TPM1-215, Transcript of tropomyosin 1, humanhuman

TSL 2

Gene TPM1, Length 653 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-215ENST00000558868 NOL7Q9UMY1 257 aaKnown RBP15.86■□□□□ 0.13
TPM1-215ENST00000558868 CEP131Q9UPN4 1083 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 MTMR7Q9Y216 660 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 GJA3Q9Y6H8 435 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 CNTNAP1P78357 1384 aa15.86■□□□□ 0.13
TPM1-215ENST00000558868 FSD2A1L4K1 749 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 USP17L5A8MUK1 530 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 SPTLC2O15270 562 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 ATP2B2Q01814 1243 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 SLC39A14Q15043 492 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 USP17L2Q6R6M4 530 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 LRRC47Q8N1G4 583 aaKnown RBP15.85■□□□□ 0.13
TPM1-215ENST00000558868 DCAF4Q8WV16 495 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 PGBD1Q96JS3 809 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 CNOT7Q9UIV1 285 aaKnown RBP15.85■□□□□ 0.13
TPM1-215ENST00000558868 CLIC4Q9Y696 253 aa15.85■□□□□ 0.13
TPM1-215ENST00000558868 A0A1W2PQ27 194 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 A0A1W2PQ64 194 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 A0A1W2PQD8 194 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 hCG_1642624A0A1W2PR95 340 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 H7C1D1 291 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 PPP6R2O75170 966 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 BMP15O95972 392 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 ICA1Q05084 483 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 ZNF543Q08ER8 600 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 ADALQ6DHV7 355 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 CCDC73Q6ZRK6 1079 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 MICALL2Q8IY33 904 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 RIOX1Q9H6W3 641 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 WDR90Q96KV7 1748 aa15.84■□□□□ 0.13
TPM1-215ENST00000558868 FAM196BA6NMK8 535 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 GOLGA8HP0CJ92 632 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 EEF2P13639 858 aaKnown RBP15.83■□□□□ 0.12
TPM1-215ENST00000558868 MRE11P49959 708 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 NBPF9Q3BBW0 867 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 LRSAM1Q6UWE0 723 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 DAGLBQ8NCG7 672 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 FTOQ9C0B1 505 aaKnown RBP eCLIP15.83■□□□□ 0.12
TPM1-215ENST00000558868 BARHL2Q9NY43 387 aa15.83■□□□□ 0.12
TPM1-215ENST00000558868 MORC2Q9Y6X9 1032 aaPredicted RBP15.83■□□□□ 0.12
TPM1-215ENST00000558868 PCNTO95613 3336 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 CYTH3O43739 400 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 TRAPPC10P48553 1259 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 NR5A1Q13285 461 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 SEPT2Q15019 361 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 CCDC96Q2M329 555 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 KIF4BQ2VIQ3 1234 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 TPRNQ4KMQ1 711 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 HEATR3Q7Z4Q2 680 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 CCAR1Q8IX12 1150 aaKnown RBP15.82■□□□□ 0.12
TPM1-215ENST00000558868 BLIDQ8IZY5 108 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 GPC2Q8N158 579 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 GMCL1P1Q8NEA9 526 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 PIBF1Q8WXW3 757 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 HOOK2Q96ED9 719 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 ARHGEF10LQ9HCE6 1279 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 EIF4ENIF1Q9NRA8 985 aaKnown RBP15.82■□□□□ 0.12
TPM1-215ENST00000558868 GINM1Q9NU53 330 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 PCDHA7Q9UN72 937 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 PCDHA4Q9UN74 947 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 MYH4Q9Y623 1939 aa15.82■□□□□ 0.12
TPM1-215ENST00000558868 SYCE3A1L190 88 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 STXBP3O00186 592 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 GDF11O95390 407 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 GH2P01242 217 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 LIG1P18858 919 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 GNA11P29992 359 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 MAP3K10Q02779 954 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 SLFN13Q68D06 897 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 WWC2Q6AWC2 1192 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 OXER1Q8TDS5 423 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 ZNF526Q8TF50 670 aaPredicted RBP15.81■□□□□ 0.12
TPM1-215ENST00000558868 MRPS27Q92552 414 aaKnown RBP15.81■□□□□ 0.12
TPM1-215ENST00000558868 GMCL1Q96IK5 515 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 TMEM39BQ9GZU3 492 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 NUP62CLQ9H1M0 184 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 SH2D4AQ9H788 454 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 C6orf50Q9HD87 102 aa15.81■□□□□ 0.12
TPM1-215ENST00000558868 DICER1Q9UPY3 1922 aaKnown RBP15.8■□□□□ 0.12
TPM1-215ENST00000558868 FRMPD2Q68DX3 1309 aaPredicted RBP15.8■□□□□ 0.12
TPM1-215ENST00000558868 ZNF541Q9H0D2 1346 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 TRIM75PA6NK02 468 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 CTAGE5O15320 804 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 CUTAO60888 179 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 SLC1A4P43007 532 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 NAPAP54920 295 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 FAM160A1Q05DH4 1040 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 RASA3Q14644 834 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 PTPAQ15257 358 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 SLC35G1Q2M3R5 365 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 PPP1R18Q6NYC8 613 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 POTEDQ86YR6 584 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 CLEC10AQ8IUN9 316 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
TPM1-215ENST00000558868 FSIP1Q8NA03 581 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 TNFRSF25Q93038 417 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 SHISA4Q96DD7 197 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 GPCPD1Q9NPB8 672 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 DACT1Q9NYF0 836 aa15.8■□□□□ 0.12
TPM1-215ENST00000558868 PNMA6FA0A0J9YX94 578 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms