RNA–Protein interactions for RNA: ENST00000557702.5

PABPN1-208, Transcript of poly(A) binding protein nuclear 1, human

TSL 2 BASIC

Gene PABPN1, Length 778 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PABPN1-208	ENST00000557702	GBF1	Q92538	1859 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702		A0A0U1RQG5	324 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	EPOP	A6NHQ4	379 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	ZBBX	A8MT70	800 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	BAG3	O95817	575 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	HLA-DOA	P06340	250 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	ZNF865	P0CJ78	1059 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	TAL1	P17542	331 aa	Predicted RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	EXOSC9	Q06265	439 aa	Known RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	RAB3GAP1	Q15042	981 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	MAPKAPK5	Q8IW41	473 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	FAM126B	Q8IXS8	530 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	RPUSD2	Q8IZ73	545 aa	Known RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	MB21D1	Q8N884	522 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	PCSK9	Q8NBP7	692 aa	Known RBP	11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	TGFBRAP1	Q8WUH2	860 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	RAI14	Q9P0K7	980 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	CNPY2	Q9Y2B0	182 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	SYNRG	Q9UMZ2	1314 aa		11.6	□□□□□ -0.55
PABPN1-208	ENST00000557702	PTPRZ1	P23471	2315 aa	Predicted RBP	11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	DCX	O43602	365 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	PLCG2	P16885	1265 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	IL15	P40933	162 aa	Predicted RBP	11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	ACER1	Q8TDN7	264 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	ARNTL2	Q8WYA1	636 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	PHOX2B	Q99453	314 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	HIPK3	Q9H422	1215 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	AATF	Q9NY61	560 aa	Known RBP eCLIP	11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	FAM184B	Q9ULE4	1060 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	CFAP54	Q96N23	3096 aa		11.59	□□□□□ -0.55
PABPN1-208	ENST00000557702	TRANK1	O15050	2925 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	CD4	P01730	458 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	ASGR1	P07306	291 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	CST5	P28325	142 aa	Predicted RBP	11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	CCL23	P55773	120 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	TIMM10	P62072	90 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	TBC1D9	Q6ZT07	1266 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	CDCA7L	Q96GN5	454 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	MFSD14A	Q96MC6	490 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	MMP19	Q99542	508 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	USP44	Q9H0E7	712 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	SPC25	Q9HBM1	224 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	DIS3	Q9Y2L1	958 aa	Known RBP	11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	ZNF318	Q5VUA4	2279 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	FLT1	P17948	1338 aa		11.58	□□□□□ -0.56
PABPN1-208	ENST00000557702	USP34	Q70CQ2	3546 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	POTEB3	A0JP26	581 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	MYADML2	A6NDP7	307 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	DUSP11	O75319	330 aa	Known RBP	11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	PGK2	P07205	417 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	C6orf222	P0C671	652 aa	Predicted RBP	11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	GRB10	Q13322	594 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	MVP	Q14764	893 aa	Known RBP	11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	LEXM	Q3ZCV2	418 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	TATDN1	Q6P1N9	297 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	POTEB	Q6S5H4	581 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	SAMD1	Q6SPF0	538 aa	Predicted RBP	11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	SPATA5	Q8NB90	893 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	TANGO6	Q9C0B7	1094 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	CABP5	Q9NP86	173 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	LRP2BP	Q9P2M1	347 aa		11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	SAP30BP	Q9UHR5	308 aa	Known RBP	11.57	□□□□□ -0.56
PABPN1-208	ENST00000557702	SIPA1L1	O43166	1804 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	KIF28P	B7ZC32	967 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	SLC25A27	O95847	323 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	DSG3	P32926	999 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	PPP4C	P60510	307 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	KCTD2	Q14681	263 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	ABCB5	Q2M3G0	1257 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	ZNF792	Q3KQV3	632 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	CERKL	Q49MI3	558 aa	Predicted RBP	11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	GNAS	Q5JWF2	1037 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	HFE2	Q6ZVN8	426 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	XAGE2	Q96GT9	111 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	UBE2Z	Q9H832	354 aa	Predicted RBP	11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	HMG20B	Q9P0W2	317 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	UMODL1	Q5DID0	1318 aa		11.56	□□□□□ -0.56
PABPN1-208	ENST00000557702	PPAN-P2RY11	A0A0B4J1V8	794 aa	Predicted RBP	11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	PTPN5	P54829	565 aa		11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	TAP1	Q03518	808 aa		11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	NAA16	Q6N069	864 aa	Predicted RBP	11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	GADD45GIP1	Q8TAE8	222 aa	Predicted RBP	11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	LMCD1	Q9NZU5	365 aa		11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	ZHX1	Q9UKY1	873 aa	Predicted RBP	11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	AKAP2	Q9Y2D5	859 aa		11.55	□□□□□ -0.56
PABPN1-208	ENST00000557702	ZNFX1	Q9P2E3	1918 aa	Known RBP	11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702		A0A1B0GUL7	405 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	LPXN	O60711	386 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	FLOT1	O75955	427 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	PFKM	P08237	780 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	IL9	P15248	144 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	KCNA5	P22460	613 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	IRX5	P78411	483 aa	Predicted RBP	11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	TTLL4	Q14679	1199 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	PTCRA	Q6ISU1	281 aa	Predicted RBP	11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	PI16	Q6UXB8	463 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	MSL3	Q8N5Y2	521 aa	Known RBP	11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	PHOSPHO2	Q8TCD6	241 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	ANKS1A	Q92625	1134 aa		11.54	□□□□□ -0.56
PABPN1-208	ENST00000557702	WNT8A	Q9H1J5	351 aa		11.54	□□□□□ -0.56

Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms