RNA–Protein interactions for RNA: ENST00000556765.1

TRAPPC6B-206, Transcript of trafficking protein particle complex 6B, humanhuman

TSL 3

Gene TRAPPC6B, Length 664 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC6B-206ENST00000556765 PATL2C9JE40 543 aaKnown RBP16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 ZNF213O14771 459 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 ENTPD3O75355 529 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 HMGCS2P54868 508 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 GSTO1P78417 241 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 MRPS5P82675 430 aaKnown RBP16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 SPP2Q13103 211 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 RAB3GAP1Q15042 981 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 GIMAP6Q6P9H5 292 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 DHX32Q7L7V1 743 aaKnown RBP16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 USP6NLQ92738 828 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 GBP4Q96PP9 640 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 RAI14Q9P0K7 980 aa16.72■□□□□ 0.27
TRAPPC6B-206ENST00000556765 MUC6Q6W4X9 2439 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 CHD9Q3L8U1 2897 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 DNM1LO00429 736 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 FGAP02671 866 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 RGS2P41220 211 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 TRDNQ13061 729 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 NAA16Q6N069 864 aaPredicted RBP16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 SPRYD3Q8NCJ5 442 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 RNPC3Q96LT9 517 aaKnown RBP16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 APBA2Q99767 749 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 IDI2Q9BXS1 227 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 ABCF2Q9UG63 623 aa16.71■□□□□ 0.27
TRAPPC6B-206ENST00000556765 DDTLA6NHG4 134 aaPredicted RBP16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 E7EWF7 191 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PEX10O60683 326 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MBD4O95243 580 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CHGBP05060 677 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CYP7A1P22680 504 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 DNAJB2P25686 324 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PRDX5P30044 214 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NFKBIBQ15653 356 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 RALYLQ86SE5 291 aaKnown RBP16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SLF2Q8IX21 1173 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ZNF280CQ8ND82 737 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GPRC5AQ8NFJ5 357 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NCOA7Q8NI08 942 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LPAR1Q92633 364 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MTA3Q9BTC8 594 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 AGXT2Q9BYV1 514 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CNNM2Q9H8M5 875 aa16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 DDX20Q9UHI6 824 aaKnown RBP16.7■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MAGEB6P1A0A0J9YX57 407 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LDHCP07864 332 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PCP11498 1178 aaKnown RBP16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MAPK4P31152 587 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 IRX3P78415 501 aaPredicted RBP16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CLEC17AQ6ZS10 378 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NAPBQ9H115 298 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 ZNF576Q9H609 170 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TXNRD2Q9NNW7 524 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PDLIM7Q9NR12 457 aa16.69■□□□□ 0.26
TRAPPC6B-206ENST00000556765 DDX11L8A8MPP1 907 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 FOXP2O15409 715 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MSCO60682 206 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 APPP05067 770 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MCM5P33992 734 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MORN1Q5T089 497 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 AKNAD1Q5T1N1 836 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 POTEEQ6S8J3 1075 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CCAR1Q8IX12 1150 aaKnown RBP16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 IFNL3Q8IZI9 196 aa16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NSUN4Q96CB9 384 aaKnown RBP16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GAS2L1Q99501 681 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 RNF41Q9H4P4 317 aaPredicted RBP16.68■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TRIM43BA6NCK2 446 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LDHBP07195 334 aaKnown RBP16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 FGD1P98174 961 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 EXOSC10Q01780 885 aaKnown RBP16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TRIM60Q495X7 471 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SLFNL1Q499Z3 407 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SH3D19Q5HYK7 790 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MFSD14CQ5VZR4 134 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SLC39A5Q6ZMH5 540 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GPR142Q7Z601 462 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SH3RF1Q7Z6J0 888 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PLEKHH3Q7Z736 793 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TRIM43Q96BQ3 446 aaPredicted RBP16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 P2RX7Q99572 595 aaKnown RBP16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PORCNQ9H237 461 aa16.67■□□□□ 0.26
TRAPPC6B-206ENST00000556765 RLFQ13129 1914 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 GOLGA6L22H0YM25 854 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 PDCP20941 246 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CNGA1P29973 690 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 HERVK_113P62684 666 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 DZIP1Q86YF9 867 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 TIFAQ96CG3 184 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NECAB3Q96P71 396 aaPredicted RBP16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 RIOK1Q9BRS2 568 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 NOL10Q9BSC4 688 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 LRFN3Q9BTN0 628 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 CRNKL1Q9BZJ0 848 aaKnown RBP16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 KRT23Q9C075 422 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SMC3Q9UQE7 1217 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 KIF3AQ9Y496 699 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 SLC4A4Q9Y6R1 1079 aa16.66■□□□□ 0.26
TRAPPC6B-206ENST00000556765 MYH2Q9UKX2 1941 aa16.65■□□□□ 0.26
TRAPPC6B-206ENST00000556765 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 93.2 ms