RNA–Protein interactions for RNA: ENST00000556571.1

ACTN1-221, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 568 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-221ENST00000556571 RAG1P15918 1043 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 ITGB8P26012 769 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 KCTD2Q14681 263 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 TMEM132BQ14DG7 1078 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 SAMD1Q6SPF0 538 aaPredicted RBP14.35□□□□□ -0.11
ACTN1-221ENST00000556571 RIOX2Q8IUF8 465 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 LCORLQ8N3X6 602 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 RHPN1Q8TCX5 695 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 SYMPKQ92797 1274 aaKnown RBP14.35□□□□□ -0.11
ACTN1-221ENST00000556571 DYNLL2Q96FJ2 89 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 IL1RAPL2Q9NP60 686 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 ATP8A2Q9NTI2 1148 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 LTBP2Q14767 1821 aa14.35□□□□□ -0.11
ACTN1-221ENST00000556571 GOLIM4O00461 696 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 PGK1P00558 417 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 PGK2P07205 417 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 RLBP1P12271 317 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 COPB2P35606 906 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 STAT3P40763 770 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 ZNF792Q3KQV3 632 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 CLEC10AQ8IUN9 316 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 CLASRPQ8N2M8 674 aaKnown RBP14.34□□□□□ -0.11
ACTN1-221ENST00000556571 TOX2Q96NM4 488 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 DNAJC2Q99543 621 aaKnown RBP14.34□□□□□ -0.11
ACTN1-221ENST00000556571 ARMT1Q9H993 441 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 TMEM39AQ9NV64 488 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 PRUNE2Q8WUY3 3088 aa14.34□□□□□ -0.11
ACTN1-221ENST00000556571 SPTBN5Q9NRC6 3674 aaKnown RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 A0A1W2PQ45 241 aaPredicted RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 A0A1W2PQY0 241 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 PQBP1O60828 265 aaKnown RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 AKR1A1P14550 325 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 CDK8P49336 464 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 EPHB4P54760 987 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 FPGSQ05932 587 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 AMOTL1Q8IY63 956 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 TSEN34Q9BSV6 310 aaKnown RBP14.33□□□□□ -0.12
ACTN1-221ENST00000556571 KANSL2Q9H9L4 492 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 PRDM6Q9NQX0 595 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 CNPY2Q9Y2B0 182 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 ROBO3Q96MS0 1386 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 CDH23Q9H251 3354 aa14.33□□□□□ -0.12
ACTN1-221ENST00000556571 EYSQ5T1H1 3165 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 DCDC2CA8MYV0 355 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 VWA5AO00534 786 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 PRKAB2O43741 272 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 IFIT2P09913 472 aaKnown RBP14.32□□□□□ -0.12
ACTN1-221ENST00000556571 ZNF865P0CJ78 1059 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-221ENST00000556571 EEF2P13639 858 aaKnown RBP14.32□□□□□ -0.12
ACTN1-221ENST00000556571 TAL1P17542 331 aaPredicted RBP14.32□□□□□ -0.12
ACTN1-221ENST00000556571 C12orf60Q5U649 245 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 ANKRD33Q7Z3H0 272 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 GOPCQ9HD26 462 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 PPP1R9AQ9ULJ8 1098 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 SMCHD1A6NHR9 2005 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 A0A0G2JMZ2 1700 aa14.32□□□□□ -0.12
ACTN1-221ENST00000556571 ADAMTS4O75173 837 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 MBD4O95243 580 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 FAAP100Q0VG06 881 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 C16orf86Q6ZW13 317 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 MIER1Q8N108 512 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 MSL3Q8N5Y2 521 aaKnown RBP14.31□□□□□ -0.12
ACTN1-221ENST00000556571 NUP133Q8WUM0 1156 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 KIF1BPQ96EK5 621 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 DDRGK1Q96HY6 314 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 STARD7Q9NQZ5 370 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 FBXO28Q9NVF7 368 aa14.31□□□□□ -0.12
ACTN1-221ENST00000556571 ZNF214Q9UL59 606 aaPredicted RBP14.31□□□□□ -0.12
ACTN1-221ENST00000556571 NAV1Q8NEY1 1877 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 MOXD2PA6NHM9 499 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 USP17L12C9JPN9 530 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 USP17L21D6R901 530 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 DNAJB2P25686 324 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 ADD2P35612 726 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 ACLYP53396 1101 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 GRIN2CQ14957 1233 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 REPS2Q8NFH8 660 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 DDX24Q9GZR7 859 aaKnown RBP eCLIP14.3□□□□□ -0.125e-6■■■■■ 34.6
ACTN1-221ENST00000556571 PAG1Q9NWQ8 432 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 FAM184BQ9ULE4 1060 aa14.3□□□□□ -0.12
ACTN1-221ENST00000556571 CYP2D7A0A087X1C5 515 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 RAD21O60216 631 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 TIMP1P01033 207 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 FAM83BQ5T0W9 1011 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 KLHDC9Q8NEP7 349 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 LENG1Q96BZ8 264 aaPredicted RBP14.29□□□□□ -0.12
ACTN1-221ENST00000556571 DDX11Q96FC9 970 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 TEX13BQ9BXU2 312 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 ZNF576Q9H609 170 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 SYNGAP1Q96PV0 1343 aa14.29□□□□□ -0.12
ACTN1-221ENST00000556571 SMIM22K7EJ46 135 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 APBB1O00213 710 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 HMMRO75330 724 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 ELP1O95163 1332 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 SNAI1O95863 264 aaPredicted RBP14.28□□□□□ -0.12
ACTN1-221ENST00000556571 UBE3CQ15386 1083 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 KCNA10Q16322 511 aa14.28□□□□□ -0.12
ACTN1-221ENST00000556571 TJAP1Q5JTD0 557 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms