RNA–Protein interactions for RNA: ENST00000556102.6

CDKN3-209, Transcript of cyclin dependent kinase inhibitor 3, humanhuman

TSL 5 BASIC

Gene CDKN3, Length 938 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN3-209ENST00000556102 ADAMTS5Q9UNA0 930 aa22.57■■□□□ 1.2
CDKN3-209ENST00000556102 DNAH12Q6ZR08 3092 aa22.57■■□□□ 1.2
CDKN3-209ENST00000556102 TDHQ8IZJ6 230 aa22.56■■□□□ 1.2
CDKN3-209ENST00000556102 APPBP2Q92624 585 aa22.56■■□□□ 1.2
CDKN3-209ENST00000556102 UBE2OQ9C0C9 1292 aaKnown RBP22.56■■□□□ 1.2
CDKN3-209ENST00000556102 FBXO28Q9NVF7 368 aa22.56■■□□□ 1.2
CDKN3-209ENST00000556102 GSG1L2A8MUP6 293 aa22.55■■□□□ 1.2
CDKN3-209ENST00000556102 FCER1AP12319 257 aa22.55■■□□□ 1.2
CDKN3-209ENST00000556102 OSBP2Q969R2 916 aa22.55■■□□□ 1.2
CDKN3-209ENST00000556102 GNL3Q9BVP2 549 aaKnown RBP eCLIP22.55■■□□□ 1.2
CDKN3-209ENST00000556102 PPP1R9AQ9ULJ8 1098 aa22.55■■□□□ 1.2
CDKN3-209ENST00000556102 ROBO3Q96MS0 1386 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 PLXNA1Q9UIW2 1896 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 RNF113AO15541 343 aaKnown RBP22.54■■□□□ 1.2
CDKN3-209ENST00000556102 SEPT4O43236 478 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 LRIT3Q3SXY7 679 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 TSHZ3Q63HK5 1081 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 GPR153Q6NV75 609 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 RIOX2Q8IUF8 465 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 ARRDC4Q8NCT1 418 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 MAML3Q96JK9 1138 aa22.54■■□□□ 1.2
CDKN3-209ENST00000556102 VWA5AO00534 786 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 RAD21O60216 631 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 ZFYP08048 801 aaPredicted RBP22.53■■□□□ 1.2
CDKN3-209ENST00000556102 RASA1P20936 1047 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 FAM83BQ5T0W9 1011 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 MMP19Q99542 508 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 MKNK2Q9HBH9 465 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 MYH4Q9Y623 1939 aa22.53■■□□□ 1.2
CDKN3-209ENST00000556102 SMCHD1A6NHR9 2005 aa22.52■■□□□ 1.2
CDKN3-209ENST00000556102 MINDY4BA8MYZ0 360 aa22.52■■□□□ 1.2
CDKN3-209ENST00000556102 GPAA1O43292 621 aa22.52■■□□□ 1.2
CDKN3-209ENST00000556102 ATN1P54259 1190 aaPredicted RBP22.52■■□□□ 1.2
CDKN3-209ENST00000556102 GJC2Q5T442 439 aaPredicted RBP22.52■■□□□ 1.2
CDKN3-209ENST00000556102 ANO1Q5XXA6 986 aa22.52■■□□□ 1.2
CDKN3-209ENST00000556102 NYAP2Q9P242 653 aa22.52■■□□□ 1.2
CDKN3-209ENST00000556102 ZNF214Q9UL59 606 aaPredicted RBP22.52■■□□□ 1.2
CDKN3-209ENST00000556102 KBTBD13C9JR72 458 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 GNAT2P19087 354 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 COPB2P35606 906 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 STAT3P40763 770 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 MDM2Q00987 491 aaPredicted RBP22.51■■□□□ 1.19
CDKN3-209ENST00000556102 PRAMEF19Q5SWL8 479 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 STK11IPQ8N1F8 1099 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 REPS2Q8NFH8 660 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 EPB41L4AQ9HCS5 686 aaPredicted RBP22.51■■□□□ 1.19
CDKN3-209ENST00000556102 NRBP1Q9UHY1 535 aa22.51■■□□□ 1.19
CDKN3-209ENST00000556102 RTP1P59025 263 aa22.5■■□□□ 1.19
CDKN3-209ENST00000556102 KCTD2Q14681 263 aa22.5■■□□□ 1.19
CDKN3-209ENST00000556102 LRRFIP1Q32MZ4 808 aaKnown RBP22.5■■□□□ 1.19
CDKN3-209ENST00000556102 M0R2C6 588 aa22.49■■□□□ 1.19
CDKN3-209ENST00000556102 TDO2P48775 406 aa22.49■■□□□ 1.19
CDKN3-209ENST00000556102 NUP88Q99567 741 aaPredicted RBP22.49■■□□□ 1.19
CDKN3-209ENST00000556102 SLF1Q9BQI6 1058 aa22.49■■□□□ 1.19
CDKN3-209ENST00000556102 ZNF287Q9HBT7 754 aa22.49■■□□□ 1.19
CDKN3-209ENST00000556102 DIS3Q9Y2L1 958 aaKnown RBP22.49■■□□□ 1.19
CDKN3-209ENST00000556102 TTC41PQ6P2S7 1318 aa22.49■■□□□ 1.19
CDKN3-209ENST00000556102 LTBP2Q14767 1821 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 F5H6K3 240 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 PGK2P07205 417 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 KLRC3Q07444 240 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 ZNF792Q3KQV3 632 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 LBHD1Q9BQE6 289 aaPredicted RBP22.48■■□□□ 1.19
CDKN3-209ENST00000556102 TINF2Q9BSI4 451 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 PRKAG2Q9UGJ0 569 aa22.48■■□□□ 1.19
CDKN3-209ENST00000556102 IGKV6D-41A0A0C4DH26 115 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 ERC2O15083 957 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 NDUFB10O96000 172 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 APPP05067 770 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 LRRC41Q15345 812 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 FAM47AQ5JRC9 791 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 SLC39A5Q6ZMH5 540 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 ZNF444Q8N0Y2 327 aaPredicted RBP22.47■■□□□ 1.19
CDKN3-209ENST00000556102 TEX13BQ9BXU2 312 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 ATP11BQ9Y2G3 1177 aa22.47■■□□□ 1.19
CDKN3-209ENST00000556102 PATL2C9JE40 543 aaKnown RBP22.46■■□□□ 1.19
CDKN3-209ENST00000556102 MYCNP04198 464 aaPredicted RBP22.46■■□□□ 1.19
CDKN3-209ENST00000556102 IFNL3Q8IZI9 196 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 DEFB123Q8N688 67 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 PI4K2BQ8TCG2 481 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 CLIP2Q9UDT6 1046 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 PCDHB15Q9Y5E8 787 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 COL6A3P12111 3177 aa22.46■■□□□ 1.19
CDKN3-209ENST00000556102 PRDM1O75626 825 aa22.45■■□□□ 1.18
CDKN3-209ENST00000556102 SNX17Q15036 470 aa22.45■■□□□ 1.18
CDKN3-209ENST00000556102 SNRNP48Q6IEG0 339 aaKnown RBP22.45■■□□□ 1.18
CDKN3-209ENST00000556102 PRPF38AQ8NAV1 312 aaKnown RBP22.45■■□□□ 1.18
CDKN3-209ENST00000556102 NACAP1Q9BZK3 213 aa22.45■■□□□ 1.18
CDKN3-209ENST00000556102 SYNPO2Q9UMS6 1093 aa22.45■■□□□ 1.18
CDKN3-209ENST00000556102 RARBP10826 455 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 ADCYAP1R1P41586 468 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 MKL1Q969V6 931 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 CEP95Q96GE4 821 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 XPNPEP3Q9NQH7 507 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 MTMR4Q9NYA4 1195 aa22.44■■□□□ 1.18
CDKN3-209ENST00000556102 PLIN4Q96Q06 1357 aa22.43■■□□□ 1.18
CDKN3-209ENST00000556102 ATP2A1O14983 1001 aa22.43■■□□□ 1.18
CDKN3-209ENST00000556102 OTUD7AQ8TE49 926 aaPredicted RBP22.43■■□□□ 1.18
CDKN3-209ENST00000556102 FERMT2Q96AC1 680 aa22.43■■□□□ 1.18
CDKN3-209ENST00000556102 SEC62Q99442 399 aaKnown RBP22.43■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms