RNA–Protein interactions for RNA: ENST00000554074.1

SLIRP-203, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 3

Gene SLIRP, Length 445 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-203ENST00000554074 COPB2P35606 906 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 ATP2B2Q01814 1243 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 CLEC10AQ8IUN9 316 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 NPLOC4Q8TAT6 608 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 GNL3Q9BVP2 549 aaKnown RBP eCLIP7.91□□□□□ -1.14
SLIRP-203ENST00000554074 ZNF287Q9HBT7 754 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 NYAP2Q9P242 653 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 DDX20Q9UHI6 824 aaKnown RBP7.91□□□□□ -1.14
SLIRP-203ENST00000554074 PCDHB15Q9Y5E8 787 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 PFASO15067 1338 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 PLIN4Q96Q06 1357 aa7.91□□□□□ -1.14
SLIRP-203ENST00000554074 SALL3Q9BXA9 1300 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 IGKV6D-41A0A0C4DH26 115 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 GPAA1O43292 621 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 RASA1P20936 1047 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 RRP1P56182 461 aaKnown RBP7.9□□□□□ -1.14
SLIRP-203ENST00000554074 AAMPQ13685 434 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 DPP9Q86TI2 863 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 TICAM2Q86XR7 235 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 RIOX2Q8IUF8 465 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 SPICE1Q8N0Z3 855 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 PI4K2BQ8TCG2 481 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 ATG4CQ96DT6 458 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 GDF15Q99988 308 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 MKNK2Q9HBH9 465 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 EPB41L4AQ9HCS5 686 aaPredicted RBP7.9□□□□□ -1.14
SLIRP-203ENST00000554074 NRBP1Q9UHY1 535 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 PPP1R9AQ9ULJ8 1098 aa7.9□□□□□ -1.14
SLIRP-203ENST00000554074 DIS3Q9Y2L1 958 aaKnown RBP7.9□□□□□ -1.14
SLIRP-203ENST00000554074 LAMA4Q16363 1823 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 PATL2C9JE40 543 aaKnown RBP7.89□□□□□ -1.15
SLIRP-203ENST00000554074 DNM1LO00429 736 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 VWA5AO00534 786 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 COBLO75128 1261 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 FCER1AP12319 257 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 MX1P20591 662 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 CYP2C19P33261 490 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 TDO2P48775 406 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 PLS1Q14651 629 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 TMEM132BQ14DG7 1078 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 ZMYM1Q5SVZ6 1142 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 TSHZ3Q63HK5 1081 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 DHX30Q7L2E3 1194 aaKnown RBP eCLIP7.89□□□□□ -1.15
SLIRP-203ENST00000554074 NCAPG2Q86XI2 1143 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 C7orf61Q8IZ16 206 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 TRPV1Q8NER1 839 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 REPS2Q8NFH8 660 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 MKL1Q969V6 931 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 YTHDC1Q96MU7 727 aaKnown RBP7.89□□□□□ -1.15
SLIRP-203ENST00000554074 NACAP1Q9BZK3 213 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 ZNF214Q9UL59 606 aaPredicted RBP7.89□□□□□ -1.15
SLIRP-203ENST00000554074 MYH6P13533 1939 aa7.89□□□□□ -1.15
SLIRP-203ENST00000554074 MINDY4BA8MYZ0 360 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 F5H6K3 240 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 M0R2C6 588 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 ATP2A1O14983 1001 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 SEPT4O43236 478 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 APPP05067 770 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 SLC3A2P08195 630 aaKnown RBP7.88□□□□□ -1.15
SLIRP-203ENST00000554074 STAT3P40763 770 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 PDE4BQ07343 736 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 KLRC3Q07444 240 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 HDAC1Q13547 482 aaPredicted RBP7.88□□□□□ -1.15
SLIRP-203ENST00000554074 LRRC26Q2I0M4 334 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 PPP4R3BQ5MIZ7 849 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 FAM83BQ5T0W9 1011 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 GPR153Q6NV75 609 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 IFNL3Q8IZI9 196 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 ZNF444Q8N0Y2 327 aaPredicted RBP7.88□□□□□ -1.15
SLIRP-203ENST00000554074 MSL3Q8N5Y2 521 aaKnown RBP7.88□□□□□ -1.15
SLIRP-203ENST00000554074 PRPF38AQ8NAV1 312 aaKnown RBP7.88□□□□□ -1.15
SLIRP-203ENST00000554074 ARRDC4Q8NCT1 418 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 GMCL1P1Q8NEA9 526 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 NEDD1Q8NHV4 660 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 MAML3Q96JK9 1138 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 SLF1Q9BQI6 1058 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 FSD1Q9BTV5 496 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 FBXO28Q9NVF7 368 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 MTMR4Q9NYA4 1195 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 STAP2Q9UGK3 403 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 LCTP09848 1927 aa7.88□□□□□ -1.15
SLIRP-203ENST00000554074 TTLL1O95922 423 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 NDUFB10O96000 172 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 FDX1P10109 184 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 CNGA1P29973 690 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 MAGEA10P43363 369 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-203ENST00000554074 OAZ1P54368 228 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 KCTD2Q14681 263 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 ZNF792Q3KQV3 632 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 LRIT3Q3SXY7 679 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 OTUD7AQ8TE49 926 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-203ENST00000554074 EVI5LQ96CN4 794 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 CEP95Q96GE4 821 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 MMP19Q99542 508 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 TEX13BQ9BXU2 312 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 NAPBQ9H115 298 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 ZBTB47Q9UFB7 747 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-203ENST00000554074 ZMYND8Q9ULU4 1186 aaPredicted RBP7.87□□□□□ -1.15
SLIRP-203ENST00000554074 SZT2Q5T011 3432 aa7.87□□□□□ -1.15
SLIRP-203ENST00000554074 LRRC37A2A6NM11 1700 aa7.86□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms