RNA–Protein interactions for RNA: ENST00000553865.1

CCNK-203, Transcript of cyclin K, humanhuman

TSL 1 (best)

Gene CCNK, Length 5,627 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNK-203ENST00000553865 DIXDC1Q155Q3 683 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 FAM98CQ17RN3 349 aaKnown RBP10.12□□□□□ -0.79
CCNK-203ENST00000553865 CROCCP2Q86T23 111 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 TMTC1Q8IUR5 882 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 MST1RQ04912 1400 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 SEMA3EO15041 775 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 EEF2P13639 858 aaKnown RBP10.12□□□□□ -0.79
CCNK-203ENST00000553865 LRCH2Q5VUJ6 765 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 CCDC25Q86WR0 208 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 CCDC26Q8TAB7 109 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 EDC3Q96F86 508 aaKnown RBP10.12□□□□□ -0.79
CCNK-203ENST00000553865 ANTXR1Q9H6X2 564 aa10.12□□□□□ -0.79
CCNK-203ENST00000553865 TAF5LO75529 589 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 INF2Q27J81 1249 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 VSIG1Q86XK7 387 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 MYCBPQ99417 103 aaPredicted RBP10.11□□□□□ -0.79
CCNK-203ENST00000553865 BCAP29Q9UHQ4 241 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 ATP6V0A2Q9Y487 856 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 TXNDC9O14530 226 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 POLD1P28340 1107 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 PPARAQ07869 468 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 HAUS3Q68CZ6 603 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 PRPF31Q8WWY3 499 aaKnown RBP10.11□□□□□ -0.79
CCNK-203ENST00000553865 KIAA1468Q9P260 1216 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 ARPP21Q9UBL0 812 aaPredicted RBP10.11□□□□□ -0.79
CCNK-203ENST00000553865 NFE2L3Q9Y4A8 694 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 UFL1O94874 794 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 PSMD6Q15008 389 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 NONOQ15233 471 aaKnown RBP eCLIP10.11□□□□□ -0.79
CCNK-203ENST00000553865 CLEC4GQ6UXB4 293 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 IQCDQ96DY2 449 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 PLIN2Q99541 437 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 VEZTQ9HBM0 779 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 CRCPO75575 148 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 IRX4P78413 519 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 PKP1Q13835 747 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 TMCO4Q5TGY1 634 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 AFAP1L2Q8N4X5 818 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 GSDMBQ8TAX9 411 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 GGA1Q9UJY5 639 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 RFX7Q2KHR2 1363 aa10.11□□□□□ -0.79
CCNK-203ENST00000553865 ZNF131P52739 623 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 PNMA8AQ86V59 439 aaPredicted RBP10.1□□□□□ -0.79
CCNK-203ENST00000553865 MYL10Q9BUA6 226 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 VPS16Q9H269 839 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CCNT1O60563 726 aaKnown RBP10.1□□□□□ -0.79
CCNK-203ENST00000553865 CMA1P23946 247 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 MTX1Q13505 466 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CSGALNACT2Q8N6G5 542 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCNK-203ENST00000553865 AATFQ9NY61 560 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCNK-203ENST00000553865 TFCP2L1Q9NZI6 479 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 SAP30BPQ9UHR5 308 aaKnown RBP10.1□□□□□ -0.79
CCNK-203ENST00000553865 MED23Q9ULK4 1368 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 LOC102724428A0A0B4J2F2 783 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 DKC1O60832 514 aaKnown RBP eCLIP10.1□□□□□ -0.79
CCNK-203ENST00000553865 ALDH1B1P30837 517 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 SIK1P57059 783 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 ARID5AQ03989 594 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 TBC1D22AQ8WUA7 517 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 SEPT8Q92599 483 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 DACT3Q96B18 629 aaPredicted RBP10.1□□□□□ -0.79
CCNK-203ENST00000553865 USP28Q96RU2 1077 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 FRMD4BQ9Y2L6 1034 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 TRAF5O00463 557 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CETN3O15182 167 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 EPB41P11171 864 aaKnown RBP10.1□□□□□ -0.79
CCNK-203ENST00000553865 PFKFB1P16118 471 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 GJC1P36383 396 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 MICAL1Q8TDZ2 1067 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 HVCN1Q96D96 273 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CCDC51Q96ER9 411 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 NCAPGQ9BPX3 1015 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CSRNP2Q9H175 543 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 NR1I2O75469 434 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 UBE3CQ15386 1083 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 NOSTRINQ8IVI9 506 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 SIRT2Q8IXJ6 389 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 IFNL3Q8IZI9 196 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 ZNF654Q8IZM8 581 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 TRIML1Q8N9V2 468 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 CABS1Q96KC9 395 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 MYO5BQ9ULV0 1848 aa10.1□□□□□ -0.79
CCNK-203ENST00000553865 HPDP32754 393 aaPredicted RBP10.09□□□□□ -0.79
CCNK-203ENST00000553865 KIFAP3Q92845 792 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 MRFAP1L1Q96HT8 127 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 JAG2Q9Y219 1238 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 GOLGA6CA6NDK9 693 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 TMEM110-MUSTN1A8MSY1 372 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 SMIM24O75264 130 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 PRDM1O75626 825 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 GOLGA6DP0CG33 693 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 ADRA2BP18089 450 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 RBM6P78332 1123 aaKnown RBP10.09□□□□□ -0.79
CCNK-203ENST00000553865 GEN1Q17RS7 908 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 ZMYM1Q5SVZ6 1142 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 MAP3K21Q5TCX8 1036 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 PHLDB3Q6NSJ2 640 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 TTLL7Q6ZT98 887 aa10.09□□□□□ -0.79
CCNK-203ENST00000553865 GOLGA6AQ9NYA3 693 aa10.09□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms