RNA–Protein interactions for RNA: ENST00000552839.6

TMEM116-218, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 511 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-218ENST00000552839 ZNFX1Q9P2E3 1918 aaKnown RBP13.53□□□□□ -0.24
TMEM116-218ENST00000552839 SMCHD1A6NHR9 2005 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 A0A0D9SFI3 127 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 TCRBV5S4A2TA0A5A2 114 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 M0R2C6 588 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 EIF5BO60841 1220 aaKnown RBP13.53□□□□□ -0.24
TMEM116-218ENST00000552839 CYBAP13498 195 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 VCAM1P19320 739 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 TDO2P48775 406 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 TATDN1Q6P1N9 297 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 LBX2Q6XYB7 198 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 SLC39A5Q6ZMH5 540 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 LCORLQ8N3X6 602 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 MYLIPQ8WY64 445 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 FAM227BQ96M60 508 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 KIAA1683Q9H0B3 1180 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 IVNS1ABPQ9Y6Y0 642 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 CCDC171Q6TFL3 1326 aa13.53□□□□□ -0.24
TMEM116-218ENST00000552839 SPDYE16A6NNV3 312 aaPredicted RBP13.52□□□□□ -0.25
TMEM116-218ENST00000552839 CHMLP26374 656 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 USP14P54578 494 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 RAB3GAP1Q15042 981 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 SLFNL1Q499Z3 407 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 ANO1Q5XXA6 986 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 ACER1Q8TDN7 264 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 BADQ92934 168 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 PUS7LQ9H0K6 701 aaKnown RBP13.52□□□□□ -0.25
TMEM116-218ENST00000552839 TTYH1Q9H313 450 aaPredicted RBP13.52□□□□□ -0.25
TMEM116-218ENST00000552839 ZNF236Q9UL36 1845 aa13.52□□□□□ -0.25
TMEM116-218ENST00000552839 EYSQ5T1H1 3165 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 NAV1Q8NEY1 1877 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 CHGBP05060 677 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 SMAD3P84022 425 aaKnown RBP13.51□□□□□ -0.25
TMEM116-218ENST00000552839 CCDC129Q6ZRS4 1044 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 ARRDC4Q8NCT1 418 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 OSBP2Q969R2 916 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 SEC62Q99442 399 aaKnown RBP13.51□□□□□ -0.25
TMEM116-218ENST00000552839 NAPBQ9H115 298 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 RPAP3Q9H6T3 665 aaPredicted RBP13.51□□□□□ -0.25
TMEM116-218ENST00000552839 PRDM6Q9NQX0 595 aa13.51□□□□□ -0.25
TMEM116-218ENST00000552839 PRDM5Q9NQX1 630 aaPredicted RBP13.51□□□□□ -0.25
TMEM116-218ENST00000552839 LAMA2P24043 3122 aaKnown RBP13.5□□□□□ -0.25
TMEM116-218ENST00000552839 KBTBD13C9JR72 458 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 POLR3DP05423 398 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-218ENST00000552839 ADORA2AP29274 412 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 SNX17Q15036 470 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 TRIM60Q495X7 471 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 CERKLQ49MI3 558 aaPredicted RBP13.5□□□□□ -0.25
TMEM116-218ENST00000552839 OLFML2BQ68BL8 750 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 SH3RF1Q7Z6J0 888 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 DPP9Q86TI2 863 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 SDR42E1Q8WUS8 393 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 RIOK1Q9BRS2 568 aaKnown RBP13.5□□□□□ -0.25
TMEM116-218ENST00000552839 ANO2Q9NQ90 1003 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 PDLIM7Q9NR12 457 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 SERPINB13Q9UIV8 391 aa13.5□□□□□ -0.25
TMEM116-218ENST00000552839 VCANP13611 3396 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 TRIM43BA6NCK2 446 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 SEPT4O43236 478 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 GUCY1A2P33402 732 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 ABCB5Q2M3G0 1257 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 TRIM43Q96BQ3 446 aaPredicted RBP13.49□□□□□ -0.25
TMEM116-218ENST00000552839 ESYT1Q9BSJ8 1104 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 MOV10L1Q9BXT6 1211 aaKnown RBP13.49□□□□□ -0.25
TMEM116-218ENST00000552839 EHD4Q9H223 541 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 ATP8A2Q9NTI2 1148 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 MCM9Q9NXL9 1143 aa13.49□□□□□ -0.25
TMEM116-218ENST00000552839 A0A0G2JMZ2 1700 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 STRNO43815 780 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 COBLO75128 1261 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 REC8O95072 547 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 MYCNP04198 464 aaPredicted RBP13.48□□□□□ -0.25
TMEM116-218ENST00000552839 SLC3A2P08195 630 aaKnown RBP13.48□□□□□ -0.25
TMEM116-218ENST00000552839 ADCYAP1R1P41586 468 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 PRAMEF19Q5SWL8 479 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 FERMT2Q96AC1 680 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 STRBPQ96SI9 672 aaKnown RBP13.48□□□□□ -0.25
TMEM116-218ENST00000552839 CABP5Q9NP86 173 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 ARPP21Q9UBL0 812 aaPredicted RBP13.48□□□□□ -0.25
TMEM116-218ENST00000552839 PARP14Q460N5 1801 aa13.48□□□□□ -0.25
TMEM116-218ENST00000552839 SGSM2O43147 1006 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 PRKAB2O43741 272 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 FOSL2P15408 326 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 ERCC3P19447 782 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 MCCP23508 829 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 ITGB8P26012 769 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 SHMT1P34896 483 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 PLCD1P51178 756 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 COG2Q14746 738 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 SEPT2Q15019 361 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 LRRC41Q15345 812 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 C1orf53Q5VUE5 145 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 TTC6Q86TZ1 520 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 ZNF589Q86UQ0 364 aaPredicted RBP13.47□□□□□ -0.25
TMEM116-218ENST00000552839 SPATC1LQ9H0A9 340 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 CTNNA3Q9UI47 895 aa13.47□□□□□ -0.25
TMEM116-218ENST00000552839 PLXNA1Q9UIW2 1896 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 COL11A1P12107 1806 aaPredicted RBP13.46□□□□□ -0.25
TMEM116-218ENST00000552839 A0A1W2PRG0 241 aa13.46□□□□□ -0.25
TMEM116-218ENST00000552839 MINDY4BA8MYZ0 360 aa13.46□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 213 ms