RNA–Protein interactions for RNA: ENST00000551320.1

PRPF40B-214, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 455 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-214ENST00000551320 AACSQ86V21 672 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 STK11IPQ8N1F8 1099 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 DEFB123Q8N688 67 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 NPLOC4Q8TAT6 608 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 SDR42E1Q8WUS8 393 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 FEZ1Q99689 392 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 GDF15Q99988 308 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 TMUB1Q9BVT8 246 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 SLC4A5Q9BY07 1137 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 NBPF3Q9H094 633 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 C11orf49Q9H6J7 331 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 AS3MTQ9HBK9 375 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 HERC5Q9UII4 1024 aaKnown RBP8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 VPS9D1Q9Y2B5 631 aa8.35□□□□□ -1.07
PRPF40B-214ENST00000551320 VCANP13611 3396 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 A0A1W2PRG0 241 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 RCCD1A6NED2 376 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 MPHOSPH10O00566 681 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 ASNSP08243 561 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 ZKSCAN1P17029 563 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 HOXA7P31268 230 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 SHMT1P34896 483 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 MORN1Q5T089 497 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 MAP3K21Q5TCX8 1036 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 PLEKHH3Q7Z736 793 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 CCAR1Q8IX12 1150 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 SPICE1Q8N0Z3 855 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 IL27Q8NEV9 243 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 USP6NLQ92738 828 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 CHMP4CQ96CF2 233 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 DNAJC2Q99543 621 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 NUDT12Q9BQG2 462 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 SENP6Q9GZR1 1112 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 RPAP3Q9H6T3 665 aaPredicted RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 CWC22Q9HCG8 908 aaKnown RBP8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 RABGEF1Q9UJ41 708 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 OGDHLQ9ULD0 1010 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 HDAC5Q9UQL6 1122 aa8.34□□□□□ -1.07
PRPF40B-214ENST00000551320 MYH1P12882 1939 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 GOLIM4O00461 696 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 MS4A1P11836 297 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 VCAM1P19320 739 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 PABPC4Q13310 644 aaKnown RBP eCLIP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 ABCB5Q2M3G0 1257 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 CERKLQ49MI3 558 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 GJC2Q5T442 439 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 CEP85Q6P2H3 762 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L2Q6R6M4 530 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 METTL16Q86W50 562 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 FOXP4Q8IVH2 680 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 FTSJ3Q8IY81 847 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 LCORLQ8N3X6 602 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 FERMT2Q96AC1 680 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 LENG1Q96BZ8 264 aaPredicted RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 FAM117AQ9C073 453 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 UBE2OQ9C0C9 1292 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 DHX36Q9H2U1 1008 aaKnown RBP8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 ARMT1Q9H993 441 aa8.33□□□□□ -1.08
PRPF40B-214ENST00000551320 COL2A1P02458 1487 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 SMARCA5O60264 1052 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 COBLO75128 1261 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 POLR3DP05423 398 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 HLA-DOAP06340 250 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 COL6A1P12109 1028 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 PDE6AP16499 860 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 PDE3AQ14432 1141 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 PLS1Q14651 629 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 TATDN1Q6P1N9 297 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 CATSPERGQ6ZRH7 1159 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 SIAH1Q8IUQ4 282 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 SIRT2Q8IXJ6 389 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 RIOK1Q9BRS2 568 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 TANGO6Q9C0B7 1094 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 GPR108Q9NPR9 543 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 MCM9Q9NXL9 1143 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 SEPT9Q9UHD8 586 aaPredicted RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 SERPINB13Q9UIV8 391 aa8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 NOP58Q9Y2X3 529 aaKnown RBP8.32□□□□□ -1.08
PRPF40B-214ENST00000551320 ZNF532Q9HCE3 1301 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 FOCADQ5VW36 1801 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 MAST2Q6P0Q8 1798 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 MAGEB6P1A0A0J9YX57 407 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L15C9J2P7 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 C19orf81C9J6K1 198 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L13C9JLJ4 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L11C9JVI0 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L18D6R9N7 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L22D6RA61 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L17D6RBQ6 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L19D6RCP7 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 USP17L20D6RJB6 530 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 CCER2I3L3R5 266 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 RAD21O60216 631 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 AKR1B1P15121 316 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 TAL1P17542 331 aaPredicted RBP8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 DNAJB2P25686 324 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 MAPK4P31152 587 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 RGS2P41220 211 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 SLC4A3P48751 1232 aa8.31□□□□□ -1.08
PRPF40B-214ENST00000551320 LSM11P83369 360 aaKnown RBP eCLIP8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms