RNA–Protein interactions for RNA: ENST00000550418.5

RBFOX1-212, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 1 (best) BASIC

Gene RBFOX1, Length 4,775 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-212ENST00000550418 TRAF1Q13077 416 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 PHLDB2Q86SQ0 1253 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 MRRFQ96E11 262 aaKnown RBP17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ZNF594Q96JF6 807 aaPredicted RBP17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ZCCHC17Q9NP64 241 aaKnown RBP17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 FRMD4BQ9Y2L6 1034 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ADCY10Q96PN6 1610 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 ROBO2Q9HCK4 1378 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 BUB1O43683 1085 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 POLD1P28340 1107 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 STAG1Q8WVM7 1258 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 LRWD1Q9UFC0 647 aa17.48■□□□□ 0.39
RBFOX1-212ENST00000550418 PPP6R2O75170 966 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 PPP2R5EQ16537 467 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 ANKRD20A3Q5VUR7 823 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 DYMQ7RTS9 669 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 PLA2G4DQ86XP0 818 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 BCORL1Q5H9F3 1711 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 SPDYE3A6NKU9 549 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 C6orf229H3BNL8 230 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 CCNT1O60563 726 aaKnown RBP17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 PRDM1O75626 825 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 CTDSPL2Q05D32 466 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 RESTQ13127 1097 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 RAB3IL1Q8TBN0 382 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 HERC4Q5GLZ8 1057 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 ZNF790Q6PG37 636 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 CCDC197Q8NCU1 140 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 AMFRQ9UKV5 643 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 ATP1A3P13637 1013 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 KRT15P19012 456 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 CABP7Q86V35 215 aa17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
RBFOX1-212ENST00000550418 hCG_1642624A0A1W2PR95 340 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 GTPBP6O43824 516 aaPredicted RBP17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 ZAP70P43403 619 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 PPP2R5AQ15172 486 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 GSDMAQ96QA5 445 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 ZMYM6O95789 1325 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 SOWAHDA6NJG2 315 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 EIF4A1P60842 406 aaKnown RBP17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 CCDC144BQ3MJ40 725 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 CFAP157Q5JU67 520 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 ANKRD13CQ8N6S4 541 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 TCP11Q8WWU5 503 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 IMPG2Q9BZV3 1241 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 CCDC169A6NNP5 214 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 CYP21A2P08686 494 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 CDC42BPBQ9Y5S2 1711 aa17.46■□□□□ 0.39
RBFOX1-212ENST00000550418 LRRD1A4D1F6 860 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 KCNQ3O43525 872 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 PARP1P09874 1014 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 MAP7D1Q3KQU3 841 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 ACRBPQ8NEB7 543 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 ENOX1Q8TC92 643 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 N4BP2L2Q92802 583 aaPredicted RBP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 TXNDC16Q9P2K2 825 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 CARMIL3Q8ND23 1372 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 HECW2Q9P2P5 1572 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 PHLDB3Q6NSJ2 640 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 IL17REQ8NFR9 667 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 RPGRQ92834 1020 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 FAM89AQ96GI7 184 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 FAM114A2Q9NRY5 505 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 NONOQ15233 471 aaKnown RBP eCLIP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 AKNAD1Q5T1N1 836 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 DCAF5Q96JK2 942 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 HAUS7Q99871 368 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 DPH5Q9H2P9 285 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 IL2RBP14784 551 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 SNX29Q8TEQ0 813 aa17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 NAP1L4Q99733 375 aaKnown RBP17.45■□□□□ 0.38
RBFOX1-212ENST00000550418 MRPL12P52815 198 aaKnown RBP17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 ZNF654Q8IZM8 581 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 ACTR5Q9H9F9 607 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 ABCC3O15438 1527 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 USP27XA6NNY8 438 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 ZNF853P0CG23 659 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 NNTQ13423 1086 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 SIRT1Q96EB6 747 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 CFAP57Q96MR6 1250 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 OSBPL5Q9H0X9 879 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 CALUO43852 315 aaPredicted RBP17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 KRT25Q7Z3Z0 450 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 PANX2Q96RD6 677 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 FAM184BQ9ULE4 1060 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 ZNF532Q9HCE3 1301 aa17.44■□□□□ 0.38
RBFOX1-212ENST00000550418 TXNDC9O14530 226 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 HEXIM1O94992 359 aaKnown RBP17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 PSMC4P43686 418 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 SH3BGRP55822 239 aaPredicted RBP17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 ARMC9Q7Z3E5 817 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 KRT12Q99456 494 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 BTG4Q9NY30 223 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 EFCAB6Q5THR3 1501 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 ANKRD7Q92527 254 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 EPB41L5Q9HCM4 733 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 PLXNC1O60486 1568 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 GAS8O95995 478 aa17.43■□□□□ 0.38
RBFOX1-212ENST00000550418 FGAP02671 866 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms