RNA–Protein interactions for RNA: ENST00000550164.5

SMARCC2-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SMARCC2, Length 4,114 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-209ENST00000550164 FBXO3Q9UK99 471 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 MRFAP1Q9Y605 127 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 ADGRG1Q9Y653 693 aa11.4□□□□□ -0.59
SMARCC2-209ENST00000550164 KIDINS220Q9ULH0 1771 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 GOLGA6L10A0A0M3HER8 536 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 FAM170AA1A519 330 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 BUB1O43683 1085 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 KRT13P13646 458 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 MRPS25P82663 173 aaKnown RBP11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 KRT31Q15323 416 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 PTPROQ16827 1216 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 INF2Q27J81 1249 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 POTEDQ86YR6 584 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 SNAP23O00161 211 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 CALRP27797 417 aaKnown RBP11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 GYG1P46976 350 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 SLC9C1Q4G0N8 1177 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 CFAP221Q4G0U5 840 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC91Q7Z6B0 441 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 KAZALD1Q96I82 304 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 TUBGCP2Q9BSJ2 902 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 TBC1D7Q9P0N9 293 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 MYO1AQ9UBC5 1043 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 SAP30BPQ9UHR5 308 aaKnown RBP11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 PIK3C2BO00750 1634 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 DLC1Q96QB1 1528 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 NDUFA10O95299 355 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 LIFRP42702 1097 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 TFAP4Q01664 338 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 PAK2Q13177 524 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 RASGRP4Q8TDF6 673 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 NLRP3Q96P20 1036 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 RNF26Q9BY78 433 aaPredicted RBP11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 CAPN7Q9Y6W3 813 aa11.39□□□□□ -0.59
SMARCC2-209ENST00000550164 C6orf229H3BNL8 230 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 CEP104O60308 925 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 TBCAO75347 108 aaKnown RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 SCG2P13521 617 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 CXCR5P32302 372 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 DCAF17Q5H9S7 520 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 MSL1Q68DK7 614 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC84Q86UT8 332 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 BLIDQ8IZY5 108 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 OXER1Q8TDS5 423 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 TAOK3Q9H2K8 898 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 DENND2AQ9ULE3 1009 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 CDC42BPGQ6DT37 1551 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 USP32Q8NFA0 1604 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 ERVV-2B6SEH9 535 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 SRGAP2O75044 1071 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 COL9A3Q14050 684 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 SYNE4Q8N205 404 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 LCORLQ8N3X6 602 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 PPANQ9NQ55 473 aaKnown RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 TFCP2L1Q9NZI6 479 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 LRWD1Q9UFC0 647 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 PARP3Q9Y6F1 533 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 EZRP15311 586 aaKnown RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 PPP1R2P41236 205 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 FMR1Q06787 632 aaKnown RBP eCLIP11.38□□□□□ -0.592e-6■■■□□ 15.8
SMARCC2-209ENST00000550164 L2HGDHQ9H9P8 463 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 ATG3Q9NT62 314 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP11.38□□□□□ -0.596e-7■■■□□ 17.6
SMARCC2-209ENST00000550164 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 SAMM50Q9Y512 469 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 NEDD4P46934 1319 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 PXDNLA1KZ92 1463 aa11.38□□□□□ -0.59
SMARCC2-209ENST00000550164 E7EVH7 732 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 CYP27B1O15528 508 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 KCNJ6P48051 423 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 C2orf54Q08AI8 447 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 NELFCDQ8IXH7 590 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 CCDC155Q8N6L0 562 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 STRBPQ96SI9 672 aaKnown RBP11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 UBN2Q6ZU65 1347 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 PICALMQ13492 652 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 NONOQ15233 471 aaKnown RBP eCLIP11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 ATG9AQ7Z3C6 839 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 LRRN4CLQ8ND94 238 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 CABS1Q96KC9 395 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 SLC39A2Q9NP94 309 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 GDAQ9Y2T3 454 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 HYOU1Q9Y4L1 999 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 MROH7-TTC4A0A0A0MT08 1334 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 DEPDC5O75140 1603 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 ANKRD62A6NC57 917 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 SYCP3Q8IZU3 236 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 MRPL44Q9H9J2 332 aaKnown RBP11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 ASAP1Q9ULH1 1129 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 VWDEQ8N2E2 1590 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 RFX7Q2KHR2 1363 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 PPLO60437 1756 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 CYP2D7A0A087X1C5 515 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 PLA2G4AP47712 749 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 MAP3K9P80192 1104 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 KLHL30Q0D2K2 578 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 SNX29Q8TEQ0 813 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 LMBR1Q8WVP7 490 aa11.37□□□□□ -0.59
SMARCC2-209ENST00000550164 TMEM110-MUSTN1A8MSY1 372 aa11.36□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 8.2 ms