RNA–Protein interactions for RNA: ENST00000550100.5

LETMD1-221, Transcript of LETM1 domain containing 1, humanhuman

TSL 2

Gene LETMD1, Length 1,480 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LETMD1-221ENST00000550100 RAD21O60216 631 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 GJB1P08034 283 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 PTPREP23469 700 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 TTC22Q5TAA0 569 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 REPS2Q8NFH8 660 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 NPLOC4Q8TAT6 608 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 NUDT12Q9BQG2 462 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 SPATC1LQ9H0A9 340 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 PLIN4Q96Q06 1357 aa14.04□□□□□ -0.16
LETMD1-221ENST00000550100 GJA8P48165 433 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 PDE4BQ07343 736 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 UBE2Q1Q7Z7E8 422 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 TBC1D10CQ8IV04 446 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 SH2D4AQ9H788 454 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 GOPCQ9HD26 462 aa14.03□□□□□ -0.16
LETMD1-221ENST00000550100 PAK6Q9NQU5 681 aaPredicted RBP14.03□□□□□ -0.16
LETMD1-221ENST00000550100 VWA5AO00534 786 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 ORC4O43929 436 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 COBLO75128 1261 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 IGHA2P01877 340 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 TSPY3P0CV98 308 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 TSPY8P0CW00 308 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 XRCC5P13010 732 aaKnown RBP14.02□□□□□ -0.16
LETMD1-221ENST00000550100 ERCC3P19447 782 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 UBXN2AP68543 259 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 MAP2K5Q13163 448 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 MAP3K21Q5TCX8 1036 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 WDR78Q5VTH9 848 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 PPP1R9AQ9ULJ8 1098 aa14.02□□□□□ -0.16
LETMD1-221ENST00000550100 CEP290O15078 2479 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 RANBP6O60518 1105 aaKnown RBP14.01□□□□□ -0.17
LETMD1-221ENST00000550100 TTLL1O95922 423 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 HMGCRP04035 888 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 NOVP48745 357 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 CACNB2Q08289 660 aaPredicted RBP14.01□□□□□ -0.17
LETMD1-221ENST00000550100 GRB14Q14449 540 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 PLS1Q14651 629 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 U2AF1L4Q8WU68 220 aaKnown RBP14.01□□□□□ -0.17
LETMD1-221ENST00000550100 DEFB118Q96PH6 123 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 ZNF214Q9UL59 606 aaPredicted RBP14.01□□□□□ -0.17
LETMD1-221ENST00000550100 RIPK3Q9Y572 518 aa14.01□□□□□ -0.17
LETMD1-221ENST00000550100 ZNFX1Q9P2E3 1918 aaKnown RBP14.01□□□□□ -0.17
LETMD1-221ENST00000550100 SLC15A5A6NIM6 579 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 SGPL1O95470 568 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 SLC3A2P08195 630 aaKnown RBP14□□□□□ -0.17
LETMD1-221ENST00000550100 CCND3P30281 292 aaPredicted RBP14□□□□□ -0.17
LETMD1-221ENST00000550100 MNX1P50219 401 aaPredicted RBP14□□□□□ -0.17
LETMD1-221ENST00000550100 CCNA1P78396 465 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 CCAR1Q8IX12 1150 aaKnown RBP14□□□□□ -0.17
LETMD1-221ENST00000550100 SOCS4Q8WXH5 440 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 CRISPLD2Q9H0B8 497 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 ZNF287Q9HBT7 754 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 ZMYM6O95789 1325 aa14□□□□□ -0.17
LETMD1-221ENST00000550100 TSPY2A6NKD2 308 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 PRKAR2AP13861 404 aaKnown RBP13.99□□□□□ -0.17
LETMD1-221ENST00000550100 ADORA2AP29274 412 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 RGS2P41220 211 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 RRP12Q5JTH9 1297 aaKnown RBP13.99□□□□□ -0.17
LETMD1-221ENST00000550100 SLFN13Q68D06 897 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 MB21D1Q8N884 522 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 GMCL1P1Q8NEA9 526 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 TRPV1Q8NER1 839 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 SLF1Q9BQI6 1058 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.99□□□□□ -0.17
LETMD1-221ENST00000550100 DIAPH3Q9NSV4 1193 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 NEDD4P46934 1319 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 SMCHD1A6NHR9 2005 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 HOXC6P09630 235 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 MCCP23508 829 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 CHMLP26374 656 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 AKNAD1Q5T1N1 836 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 RCSD1Q6JBY9 416 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 NCAPG2Q86XI2 1143 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 SHCBP1Q8NEM2 672 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 APBA2Q99767 749 aa13.99□□□□□ -0.17
LETMD1-221ENST00000550100 RPTORQ8N122 1335 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 CYP2C19P33261 490 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 STAT3P40763 770 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 SNAP25P60880 206 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 PTH1RQ03431 593 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 RIOX2Q8IUF8 465 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 DIS3LQ8TF46 1054 aaKnown RBP13.98□□□□□ -0.17
LETMD1-221ENST00000550100 STAG1Q8WVM7 1258 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 KIFC2Q96AC6 838 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 STX8Q9UNK0 236 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 TAF6LQ9Y6J9 622 aa13.98□□□□□ -0.17
LETMD1-221ENST00000550100 DNAH12Q6ZR08 3092 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 TMEM232C9JQI7 657 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 TFRCP02786 760 aaKnown RBP13.97□□□□□ -0.17
LETMD1-221ENST00000550100 PGK2P07205 417 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 BMP3P12645 472 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 ZKSCAN1P17029 563 aaPredicted RBP13.97□□□□□ -0.17
LETMD1-221ENST00000550100 TAL1P17542 331 aaPredicted RBP13.97□□□□□ -0.17
LETMD1-221ENST00000550100 PRAMEF19Q5SWL8 479 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 LHX8Q68G74 356 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 TTBK2Q6IQ55 1244 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 KCTD1Q719H9 257 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 PRPF38AQ8NAV1 312 aaKnown RBP13.97□□□□□ -0.17
LETMD1-221ENST00000550100 TMEM47Q9BQJ4 181 aa13.97□□□□□ -0.17
LETMD1-221ENST00000550100 ZKSCAN3Q9BRR0 538 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms