RNA–Protein interactions for RNA: ENST00000550070.6

ERBB3-214, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 2,729 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-214ENST00000550070 ENAHQ8N8S7 591 aaPredicted RBP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 TRERF1Q96PN7 1200 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 BLZF1Q9H2G9 400 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 UTP3Q9NQZ2 479 aaKnown RBP eCLIP11.64□□□□□ -0.55
ERBB3-214ENST00000550070 ADAM21Q9UKJ8 722 aa11.64□□□□□ -0.55
ERBB3-214ENST00000550070 PRPF3O43395 683 aaKnown RBP11.63□□□□□ -0.55
ERBB3-214ENST00000550070 CAPN2P17655 700 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 CYP7A1P22680 504 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 KRT31Q15323 416 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 NPY5RQ15761 445 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 CNGA4Q8IV77 575 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 MSANTD4Q8NCY6 345 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 BANK1Q8NDB2 785 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 HNRNPLLQ8WVV9 542 aaKnown RBP11.63□□□□□ -0.55
ERBB3-214ENST00000550070 ESR2Q92731 530 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 FERMT2Q96AC1 680 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 ZBTB9Q96C00 473 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 RAB21Q9UL25 225 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 IQSEC3Q9UPP2 1182 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-214ENST00000550070 NHSL1Q5SYE7 1610 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 XDHP47989 1333 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 ITIH6Q6UXX5 1313 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 BCL9LQ86UU0 1499 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 RTL9Q8NET4 1388 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 CTAGE9A4FU28 777 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 ERVV-1B6SEH8 477 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 SUSD4Q5VX71 490 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 TNFRSF25Q93038 417 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 TSPAN18Q96SJ8 248 aa11.63□□□□□ -0.55
ERBB3-214ENST00000550070 SOS2Q07890 1332 aaPredicted RBP11.63□□□□□ -0.55
ERBB3-214ENST00000550070 PLCH1Q4KWH8 1693 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 USP5P45974 858 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 PTGDRQ13258 359 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 PPP2R5BQ15173 497 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 E2F4Q16254 413 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 NBPF5PQ86XG9 351 aaPredicted RBP11.62□□□□□ -0.55
ERBB3-214ENST00000550070 CCDC51Q96ER9 411 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 ZSCAN10Q96SZ4 725 aaPredicted RBP11.62□□□□□ -0.55
ERBB3-214ENST00000550070 MTRQ99707 1265 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 VPS16Q9H269 839 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 SUGCTQ9HAC7 445 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 ABCB6Q9NP58 842 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 ABHD10Q9NUJ1 306 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 ANAPC4Q9UJX5 808 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 TTF2Q9UNY4 1162 aaKnown RBP11.62□□□□□ -0.55
ERBB3-214ENST00000550070 CYP2D7A0A087X1C5 515 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 LRRC10BA6NIK2 292 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 N4BP3O15049 544 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 ARHGAP25P42331 645 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 GPS2Q13227 327 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 MCM6Q14566 821 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 TTC38Q5R3I4 469 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 PDE11AQ9HCR9 933 aa11.62□□□□□ -0.55
ERBB3-214ENST00000550070 LIMA1Q9UHB6 759 aaKnown RBP11.62□□□□□ -0.55
ERBB3-214ENST00000550070 RHOXF2BP0C7M4 288 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 ATP2C1P98194 919 aaPredicted RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 RBM26Q5T8P6 1007 aaKnown RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 RRAGBQ5VZM2 374 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 TMTC1Q8IUR5 882 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 RHOXF2Q9BQY4 288 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 L1RE1Q9UN81 338 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 BAZ2AQ9UIF9 1905 aaKnown RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 MAGEB6P1A0A0J9YX57 407 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 BMP15O95972 392 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 COPB1P53618 953 aaKnown RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 RAD51AP2Q09MP3 1159 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 TROAPQ12815 778 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 FOXD4Q12950 439 aaPredicted RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 TUBB2AQ13885 445 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 IL17AQ16552 155 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 MUM1L1Q5H9M0 696 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 IFIT1BQ5T764 474 aaKnown RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 WWC2Q6AWC2 1192 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 HDXQ7Z353 690 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 EXOC4Q96A65 974 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 NAPGQ99747 312 aaPredicted RBP11.61□□□□□ -0.55
ERBB3-214ENST00000550070 TUBB2BQ9BVA1 445 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 TAB2Q9NYJ8 693 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 ABCF2Q9UG63 623 aa11.61□□□□□ -0.55
ERBB3-214ENST00000550070 BCL9O00512 1426 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 POTEB2H3BUK9 544 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 ADAMTS3O15072 1205 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 N4BP1O75113 896 aaKnown RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 IL6STP40189 918 aaPredicted RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 VSNL1P62760 191 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 ZSCAN26Q16670 478 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 PDXDC2PQ6P474 469 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 CATIPQ7Z7H3 387 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 RNF217Q8TC41 542 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 AK7Q96M32 723 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 NUP88Q99567 741 aaPredicted RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 SLF1Q9BQI6 1058 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 PSD3Q9NYI0 1048 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 RWDD2AQ9UIY3 292 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 MYH13Q9UKX3 1938 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 ABCA3Q99758 1704 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 BAZ2BQ9UIF8 2168 aaKnown RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 SSR1P43307 286 aaKnown RBP11.6□□□□□ -0.55
ERBB3-214ENST00000550070 LMAN1P49257 510 aa11.6□□□□□ -0.55
ERBB3-214ENST00000550070 DYNLL1P63167 89 aaKnown RBP11.6□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms