RNA–Protein interactions for RNA: ENST00000545305.1

SCARB1-209, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2

Gene SCARB1, Length 851 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-209ENST00000545305 GUCY1B3Q02153 619 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 KLRC3Q07444 240 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 PRKG1Q13976 671 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 NOL9Q5SY16 702 aaKnown RBP15.94■□□□□ 0.14
SCARB1-209ENST00000545305 ACER1Q8TDN7 264 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 KLRG1Q96E93 195 aa15.94■□□□□ 0.14
SCARB1-209ENST00000545305 RRP36Q96EU6 259 aaKnown RBP15.94■□□□□ 0.14
SCARB1-209ENST00000545305 GLIS2Q9BZE0 524 aaPredicted RBP15.94■□□□□ 0.14
SCARB1-209ENST00000545305 SEC63Q9UGP8 760 aaKnown RBP15.94■□□□□ 0.14
SCARB1-209ENST00000545305 A0A1W2PRG0 241 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 SCG2P13521 617 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 ECE1P42892 770 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 MCTP1Q6DN14 999 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 LDHDQ86WU2 507 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 FBXO18Q8NFZ0 1043 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.93■□□□□ 0.14
SCARB1-209ENST00000545305 PIBF1Q8WXW3 757 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 AIFM3Q96NN9 605 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 VCPKMTQ9H867 229 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 FRMD4AQ9P2Q2 1039 aaPredicted RBP15.93■□□□□ 0.14
SCARB1-209ENST00000545305 CSADQ9Y600 493 aa15.93■□□□□ 0.14
SCARB1-209ENST00000545305 USP2O75604 605 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 BMP3P12645 472 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 MAP3K9P80192 1104 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 IKQ13123 557 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 GNL2Q13823 731 aaKnown RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 TTLL12Q14166 644 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 SAFBQ15424 915 aaKnown RBP eCLIP15.92■□□□□ 0.142e-6■■□□□ 11.8
SCARB1-209ENST00000545305 ZYXQ15942 572 aaKnown RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 PFKFB3Q16875 520 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 KRT40Q6A162 431 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 KCTD1Q719H9 257 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 FERMT3Q86UX7 667 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 ZKSCAN4Q969J2 545 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 UBA5Q9GZZ9 404 aa15.92■□□□□ 0.14
SCARB1-209ENST00000545305 ZSCAN16Q9H4T2 348 aaPredicted RBP15.92■□□□□ 0.14
SCARB1-209ENST00000545305 hCG_1642624A0A1W2PR95 340 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 GOLGA6L22H0YM25 854 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 PTPRAP18433 802 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 USP14P54578 494 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 PKN1Q16512 942 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 ARMC9Q7Z3E5 817 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 CCDC84Q86UT8 332 aaPredicted RBP15.91■□□□□ 0.14
SCARB1-209ENST00000545305 HOMER1Q86YM7 354 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 ZNF526Q8TF50 670 aaPredicted RBP15.91■□□□□ 0.14
SCARB1-209ENST00000545305 WDR18Q9BV38 432 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 KIAA1683Q9H0B3 1180 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 FZD1Q9UP38 647 aa15.91■□□□□ 0.14
SCARB1-209ENST00000545305 UBE2Q2LH0YL09 131 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 hCG_1984214I3L0E3 225 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 CYTH3O43739 400 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 BAG4O95429 457 aaKnown RBP15.9■□□□□ 0.14
SCARB1-209ENST00000545305 POTEIP0CG38 1075 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 POTEJP0CG39 1038 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 RESTQ13127 1097 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 MAP1SQ66K74 1059 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-209ENST00000545305 DLK2Q6UY11 383 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 CLEC17AQ6ZS10 378 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 SPICE1Q8N0Z3 855 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 FAM177A1Q8N128 213 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-209ENST00000545305 ZNF713Q8N859 430 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-209ENST00000545305 CCDC148Q8NFR7 591 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 LPAR1Q92633 364 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 NUP88Q99567 741 aaPredicted RBP15.9■□□□□ 0.14
SCARB1-209ENST00000545305 CPVLQ9H3G5 476 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 RIOX1Q9H6W3 641 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 VAT1LQ9HCJ6 419 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 BRMS1Q9HCU9 246 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 PAPPA2Q9BXP8 1791 aa15.9■□□□□ 0.14
SCARB1-209ENST00000545305 OTOFQ9HC10 1997 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 USP17L10C9JJH3 530 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 TMEM232C9JQI7 657 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 MMP1P03956 469 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 VGLL4Q14135 290 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 SLC35G1Q2M3R5 365 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 FAM83BQ5T0W9 1011 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 TTBK2Q6IQ55 1244 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 HEATR3Q7Z4Q2 680 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 ANKRD13AQ8IZ07 590 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 ADGRF4Q8IZF3 695 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 ZNF280CQ8ND82 737 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 CCDC12Q8WUD4 166 aaPredicted RBP15.89■□□□□ 0.13
SCARB1-209ENST00000545305 PIGSQ96S52 555 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 NMRK2Q9NPI5 230 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 SH3GLB2Q9NR46 395 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 VPS54Q9P1Q0 977 aa15.89■□□□□ 0.13
SCARB1-209ENST00000545305 UTRNP46939 3433 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 DDX11L8A8MPP1 907 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 WDR46O15213 610 aaKnown RBP15.88■□□□□ 0.13
SCARB1-209ENST00000545305 NCLP19338 710 aaKnown RBP15.88■□□□□ 0.13
SCARB1-209ENST00000545305 CALML3P27482 149 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 SLC16A2P36021 539 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 STAT2P52630 851 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 NLRP5P59047 1200 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 KIF23Q02241 960 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-209ENST00000545305 SPP2Q13103 211 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 MTMR2Q13614 643 aa15.88■□□□□ 0.13
SCARB1-209ENST00000545305 FOXD4L6Q3SYB3 417 aaPredicted RBP15.88■□□□□ 0.13
SCARB1-209ENST00000545305 SYDE2Q5VT97 1194 aa15.88■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms