RNA–Protein interactions for RNA: ENST00000545266.1

COPA-206, Transcript of coatomer protein complex subunit alpha, humanhuman

TSL 2

Gene COPA, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPA-206ENST00000545266 GAB4Q2WGN9 574 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 DCAF15Q66K64 600 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 DPH6Q7L8W6 267 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 MISP3Q96FF7 219 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 EPN3Q9H201 632 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 GP6Q9HCN6 339 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 VAV3Q9UKW4 847 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 PCDHB12Q9Y5F1 795 aa8.61□□□□□ -1.03
COPA-206ENST00000545266 PITPNM2Q9BZ72 1349 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 U2SURPO15042 1029 aaKnown RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 SIGLEC6O43699 453 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 DDAH1O94760 285 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 TP53P04637 393 aaPredicted RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 EPHX1P07099 455 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 PRKCQQ04759 706 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 NMIQ13287 307 aaPredicted RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 SNW1Q13573 536 aaKnown RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 RASGRF1Q13972 1273 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 RASA3Q14644 834 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 ST13P5Q8NFI4 369 aaPredicted RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 SYTL5Q8TDW5 730 aaPredicted RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 HSPA12BQ96MM6 686 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 ST7Q9NRC1 585 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 BSDC1Q9NW68 430 aaPredicted RBP8.6□□□□□ -1.03
COPA-206ENST00000545266 WHRNQ9P202 907 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 FHOD1Q9Y613 1164 aa8.6□□□□□ -1.03
COPA-206ENST00000545266 ITIH2P19823 946 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 ZNF445P59923 1031 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 TCEAL1Q15170 157 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 CCDC144BQ3MJ40 725 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 HEATR6Q6AI08 1181 aaKnown RBP8.59□□□□□ -1.03
COPA-206ENST00000545266 ARHGAP27Q6ZUM4 889 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 TMC3Q7Z5M5 1100 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 TSPYL5Q86VY4 417 aaPredicted RBP8.59□□□□□ -1.03
COPA-206ENST00000545266 DAGLBQ8NCG7 672 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 PMFBP1Q8TBY8 1022 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 RCC1LQ96I51 464 aaKnown RBP8.59□□□□□ -1.03
COPA-206ENST00000545266 HDAC8Q9BY41 377 aa8.59□□□□□ -1.03
COPA-206ENST00000545266 SHISA3A0PJX4 238 aa8.58□□□□□ -1.04
COPA-206ENST00000545266 SUSD5O60279 629 aa8.58□□□□□ -1.04
COPA-206ENST00000545266 EEPD1Q7L9B9 569 aa8.58□□□□□ -1.04
COPA-206ENST00000545266 WFDC3Q8IUB2 231 aa8.58□□□□□ -1.04
COPA-206ENST00000545266 ZNF655Q8N720 491 aaPredicted RBP8.58□□□□□ -1.04
COPA-206ENST00000545266 TRIT1Q9H3H1 467 aaKnown RBP8.58□□□□□ -1.04
COPA-206ENST00000545266 GPATCH2Q9NW75 528 aa8.58□□□□□ -1.04
COPA-206ENST00000545266 PDPK1O15530 556 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 CAPNS1P04632 268 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 NAT2P11245 290 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 NFE2L2Q16236 605 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 CDKAL1Q5VV42 579 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 TMPRSS7Q7RTY8 843 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 ARHGEF39Q8N4T4 335 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 BCL7CQ8WUZ0 217 aaPredicted RBP8.57□□□□□ -1.04
COPA-206ENST00000545266 HRASLS5Q96KN8 279 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 DEPDC7Q96QD5 511 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 GBP3Q9H0R5 595 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 SNTG2Q9NY99 539 aa8.57□□□□□ -1.04
COPA-206ENST00000545266 FAM221BA6H8Z2 402 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 PRAMEF1O95521 474 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 NFXL1Q6ZNB6 911 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 STK11IPQ8N1F8 1099 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 ASB11Q8WXH4 323 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 APBA2Q99767 749 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 CHST7Q9NS84 486 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 FAM86C1Q9NVL1 165 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 FBXL21Q9UKT6 434 aa8.56□□□□□ -1.04
COPA-206ENST00000545266 CDK11AQ9UQ88 783 aaPredicted RBP8.56□□□□□ -1.04
COPA-206ENST00000545266 DIS3Q9Y2L1 958 aaKnown RBP8.56□□□□□ -1.04
COPA-206ENST00000545266 PPM1BO75688 479 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 ITGA4P13612 1032 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 SLC10A6Q3KNW5 377 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 UBE2FQ969M7 185 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 ASCC2Q9H1I8 757 aaPredicted RBP8.55□□□□□ -1.04
COPA-206ENST00000545266 GFOD1Q9NXC2 390 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 ZNF281Q9Y2X9 895 aa8.55□□□□□ -1.04
COPA-206ENST00000545266 H3BS24 57 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 CTSKP43235 329 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 AOC3Q16853 763 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 JMYQ8N9B5 988 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 PIF1Q9H611 641 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 ZSWIM4Q9H7M6 989 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 LMCD1Q9NZU5 365 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 ZSWIM5Q9P217 1185 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 APEX2Q9UBZ4 518 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 CCDC39Q9UFE4 941 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 EMC9Q9Y3B6 208 aa8.54□□□□□ -1.04
COPA-206ENST00000545266 WASH4PA8MWX3 477 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 ESR1P03372 595 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 TPP2P29144 1249 aaPredicted RBP8.53□□□□□ -1.04
COPA-206ENST00000545266 VSIG10LQ86VR7 867 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 LINC00116Q8NCU8 138 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 TCTN2Q96GX1 697 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 SGSM3Q96HU1 749 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 MRGPRX3Q96LB0 322 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 FGD4Q96M96 766 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 ATP13A1Q9HD20 1204 aa8.53□□□□□ -1.04
COPA-206ENST00000545266 GSNP06396 782 aa8.52□□□□□ -1.05
COPA-206ENST00000545266 SSTR4P31391 388 aa8.52□□□□□ -1.05
COPA-206ENST00000545266 GRB10Q13322 594 aa8.52□□□□□ -1.05
COPA-206ENST00000545266 NOL9Q5SY16 702 aaKnown RBP8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms