RNA–Protein interactions for RNA: ENST00000542337.5

DDB1-220, Transcript of damage specific DNA binding protein 1, humanhuman

TSL 3

Gene DDB1, Length 558 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDB1-220ENST00000542337 TSPY3P0CV98 308 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 TSPY8P0CW00 308 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 CCND3P30281 292 aaPredicted RBP24.09■■□□□ 1.45
DDB1-220ENST00000542337 FAM83BQ5T0W9 1011 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 ABRAQ8N0Z2 381 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 DIS3LQ8TF46 1054 aaKnown RBP24.09■■□□□ 1.45
DDB1-220ENST00000542337 C11orf49Q9H6J7 331 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 PPP1R9AQ9ULJ8 1098 aa24.09■■□□□ 1.45
DDB1-220ENST00000542337 F5H6K3 240 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 MSCO60682 206 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 FCER1AP12319 257 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 CNGA1P29973 690 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 COPB2P35606 906 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 KLRC3Q07444 240 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 PPARAQ07869 468 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 TMEM132BQ14DG7 1078 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 NPLOC4Q8TAT6 608 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 FLRT1Q9NZU1 646 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 ADAMTS5Q9UNA0 930 aa24.08■■□□□ 1.45
DDB1-220ENST00000542337 CTDP1Q9Y5B0 961 aaPredicted RBP24.08■■□□□ 1.45
DDB1-220ENST00000542337 VWA5AO00534 786 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 TTLL1O95922 423 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 PPP4R3BQ5MIZ7 849 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 OLFML2BQ68BL8 750 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 TICAM2Q86XR7 235 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 HELLSQ9NRZ9 838 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 FBXO28Q9NVF7 368 aa24.07■■□□□ 1.44
DDB1-220ENST00000542337 STAT3P40763 770 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 CHRDL2Q6WN34 429 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 SLF1Q9BQI6 1058 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 LNPKQ9C0E8 428 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 MTMR4Q9NYA4 1195 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 SYNPO2Q9UMS6 1093 aa24.06■■□□□ 1.44
DDB1-220ENST00000542337 IGKV6D-41A0A0C4DH26 115 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 NDUFB10O96000 172 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 CYP2C19P33261 490 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 TFAP4Q01664 338 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 LHX8Q68G74 356 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 RIOX2Q8IUF8 465 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 NEDD1Q8NHV4 660 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 MKL1Q969V6 931 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 CEP95Q96GE4 821 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 MMP19Q99542 508 aa24.05■■□□□ 1.44
DDB1-220ENST00000542337 TRIM6-TRIM34B2RNG4 842 aa24.04■■□□□ 1.44
DDB1-220ENST00000542337 KCTD2Q14681 263 aa24.04■■□□□ 1.44
DDB1-220ENST00000542337 B4GALNT3Q6L9W6 998 aa24.04■■□□□ 1.44
DDB1-220ENST00000542337 CCDC129Q6ZRS4 1044 aa24.04■■□□□ 1.44
DDB1-220ENST00000542337 PRPF38AQ8NAV1 312 aaKnown RBP24.04■■□□□ 1.44
DDB1-220ENST00000542337 NUP88Q99567 741 aaPredicted RBP24.04■■□□□ 1.44
DDB1-220ENST00000542337 DDX20Q9UHI6 824 aaKnown RBP24.04■■□□□ 1.44
DDB1-220ENST00000542337 COBLO75128 1261 aa24.03■■□□□ 1.44
DDB1-220ENST00000542337 ZBED4O75132 1171 aa24.03■■□□□ 1.44
DDB1-220ENST00000542337 MNX1P50219 401 aaPredicted RBP24.02■■□□□ 1.44
DDB1-220ENST00000542337 MCMDC2Q4G0Z9 681 aa24.02■■□□□ 1.44
DDB1-220ENST00000542337 FAM47AQ5JRC9 791 aa24.02■■□□□ 1.44
DDB1-220ENST00000542337 SMC5Q8IY18 1101 aa24.02■■□□□ 1.44
DDB1-220ENST00000542337 GMCL1P1Q8NEA9 526 aa24.02■■□□□ 1.44
DDB1-220ENST00000542337 FEM1BQ9UK73 627 aa24.02■■□□□ 1.44
DDB1-220ENST00000542337 TSPY2A6NKD2 308 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 CHD1LQ86WJ1 897 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 C7orf61Q8IZ16 206 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 RILPL2Q969X0 211 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 TEX13BQ9BXU2 312 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 ISY1Q9ULR0 285 aaKnown RBP24.01■■□□□ 1.43
DDB1-220ENST00000542337 CEP290O15078 2479 aa24.01■■□□□ 1.43
DDB1-220ENST00000542337 SLFN13Q68D06 897 aa24■■□□□ 1.43
DDB1-220ENST00000542337 LRRC47Q8N1G4 583 aaKnown RBP24■■□□□ 1.43
DDB1-220ENST00000542337 EXOC6Q8TAG9 804 aa24■■□□□ 1.43
DDB1-220ENST00000542337 KIFC2Q96AC6 838 aa24■■□□□ 1.43
DDB1-220ENST00000542337 MAML3Q96JK9 1138 aa24■■□□□ 1.43
DDB1-220ENST00000542337 ZNF214Q9UL59 606 aaPredicted RBP24■■□□□ 1.43
DDB1-220ENST00000542337 BMP3P12645 472 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 CYBAP13498 195 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 CTDSPL2Q05D32 466 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 ALX1Q15699 326 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 SNRNP48Q6IEG0 339 aaKnown RBP23.99■■□□□ 1.43
DDB1-220ENST00000542337 REPS2Q8NFH8 660 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 RBM27Q9P2N5 1060 aaKnown RBP23.99■■□□□ 1.43
DDB1-220ENST00000542337 DIS3Q9Y2L1 958 aaKnown RBP23.99■■□□□ 1.43
DDB1-220ENST00000542337 PLIN4Q96Q06 1357 aa23.99■■□□□ 1.43
DDB1-220ENST00000542337 RLFQ13129 1914 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 RANBP6O60518 1105 aaKnown RBP23.98■■□□□ 1.43
DDB1-220ENST00000542337 IGHA2P01877 340 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 FDX1P10109 184 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 SLC4A3P48751 1232 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 MFAP1P55081 439 aaKnown RBP23.98■■□□□ 1.43
DDB1-220ENST00000542337 VPS53Q5VIR6 699 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 ARRDC4Q8NCT1 418 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 TRPV1Q8NER1 839 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 ANAPC4Q9UJX5 808 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 STX8Q9UNK0 236 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 A0A0G2JMZ2 1700 aa23.98■■□□□ 1.43
DDB1-220ENST00000542337 SEPT4O43236 478 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 IGHDP01880 384 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 COL6A1P12109 1028 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 FXR1P51114 621 aaKnown RBP eCLIP23.97■■□□□ 1.432e-6■■■□□ 16.8
DDB1-220ENST00000542337 NUCB1Q02818 461 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 CPXCR1Q8N123 301 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 CHURC1Q8WUH1 139 aa23.97■■□□□ 1.43
DDB1-220ENST00000542337 DDX11Q96FC9 970 aa23.97■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms