RNA–Protein interactions for RNA: ENST00000540802.1

SOX9-AS1-214, SOX9 antisense RNA 1, humanhuman

TSL 4 BASIC

Gene SOX9-AS1, Length 578 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-214ENST00000540802 SYTL5Q8TDW5 730 aaPredicted RBP7.03□□□□□ -1.28
SOX9-AS1-214ENST00000540802 SPON2Q9BUD6 331 aa7.03□□□□□ -1.28
SOX9-AS1-214ENST00000540802 METTL5Q9NRN9 209 aaKnown RBP7.03□□□□□ -1.28
SOX9-AS1-214ENST00000540802 MEIS3P2A8K0S8 358 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 NME1P15531 152 aaKnown RBP7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 POLR2BP30876 1174 aaKnown RBP7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 FANCCQ00597 558 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 NMIQ13287 307 aaPredicted RBP7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 NR0B2Q15466 257 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CLEC16AQ2KHT3 1053 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 KIAA0825Q8IV33 1275 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 USHBP1Q8N6Y0 703 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DAGLBQ8NCG7 672 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DHX38Q92620 1227 aaKnown RBP7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ANTXR1Q9H6X2 564 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 EBF1Q9UH73 591 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CCDC88BA6NC98 1476 aa7.02□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TNFRSF10CO14798 259 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 MCM4P33991 863 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CHMP4BP1P59074 171 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 PKN1Q16512 942 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 OXR1Q8N573 874 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 LINC01599Q8WXQ3 324 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 HDAC8Q9BY41 377 aa7.01□□□□□ -1.29
SOX9-AS1-214ENST00000540802 FITM1A5D6W6 292 aa7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TRHRP34981 398 aaPredicted RBP7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 RNF111Q6ZNA4 994 aa7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CILP2Q8IUL8 1156 aa7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 LILRA2Q8N149 483 aa7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ZNF655Q8N720 491 aaPredicted RBP7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ASCC2Q9H1I8 757 aaPredicted RBP7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 PDS5BQ9NTI5 1447 aa7□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CUX2O14529 1486 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CLEC3AO75596 197 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 KRT1P04264 644 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 VAMP1P23763 118 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TIGD5Q53EQ6 642 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 INTS3Q68E01 1043 aaKnown RBP6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TMC3Q7Z5M5 1100 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 USP48Q86UV5 1035 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SPPL2CQ8IUH8 684 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TMEM192Q8IY95 271 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 FBXO15Q8NCQ5 510 aaPredicted RBP6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SYTL4Q96C24 671 aaPredicted RBP6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TCTN2Q96GX1 697 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 G6PC3Q9BUM1 346 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 NSUN3Q9H649 340 aaKnown RBP6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 C19orf44Q9H6X5 657 aa6.99□□□□□ -1.29
SOX9-AS1-214ENST00000540802 KRTAP4-8A0A0G2JLE6 195 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 TSPAN15O95858 294 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DUSP4Q13115 394 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SNW1Q13573 536 aaKnown RBP6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SYDE1Q6ZW31 735 aaPredicted RBP6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 LINC00116Q8NCU8 138 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DIRC2Q96SL1 478 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 PPP1R16BQ96T49 567 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SLC9A7Q96T83 725 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 PRDM14Q9GZV8 571 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 RNF32Q9H0A6 362 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ZNRF3Q9ULT6 936 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ERCC6Q03468 1493 aa6.98□□□□□ -1.29
SOX9-AS1-214ENST00000540802 WDR62O43379 1518 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 RACK1P63244 317 aaKnown RBP6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 CHRNEQ04844 493 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 SNX17Q15036 470 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ZNF394Q53GI3 561 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 ANKS4BQ8N8V4 417 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 RNF34Q969K3 372 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 KCNK12Q9HB15 430 aa6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DCP1AQ9NPI6 582 aaPredicted RBP6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 DDX41Q9UJV9 622 aaKnown RBP6.97□□□□□ -1.29
SOX9-AS1-214ENST00000540802 NOTOA8MTQ0 251 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 SIGLEC6O43699 453 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 ACRP10323 421 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 IMPDH2P12268 514 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 RAP1GAPP47736 663 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 HOMEZQ8IX15 550 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 SHISA4Q96DD7 197 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 ZNF512BQ96KM6 892 aaPredicted RBP6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 SLC6A18Q96N87 628 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 FOXP3Q9BZS1 431 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 CWC22Q9HCG8 908 aaKnown RBP6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 YBX2Q9Y2T7 364 aaKnown RBP6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 PCDHGB7Q9Y5F8 929 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 FANCD2Q9BXW9 1451 aa6.96□□□□□ -1.3
SOX9-AS1-214ENST00000540802 TMEM82A0PJX8 343 aa6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 PRAMEF1O95521 474 aa6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 RPL10P27635 214 aaKnown RBP6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 PCBP3P57721 371 aaKnown RBP6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 IRF2BP1Q8IU81 584 aa6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 TAB3Q8N5C8 712 aaPredicted RBP6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 EPB41L4BQ9H329 900 aa6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 TCFL5Q9UL49 500 aa6.95□□□□□ -1.3
SOX9-AS1-214ENST00000540802 MRC2Q9UBG0 1479 aa6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 CEP164Q9UPV0 1460 aa6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 SCAMP3O14828 347 aaKnown RBP6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 PSPNO60542 156 aa6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 RECKO95980 971 aa6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 C1QTNF9P0C862 333 aa6.94□□□□□ -1.3
SOX9-AS1-214ENST00000540802 BBS9Q3SYG4 887 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 15.2 ms